Top 10 Hotels in Southern Minnesota, MN from ₩90,479 - Competitive Prices

A calm lake with a row of canoes on the shore and a single canoe on the water.

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Our top choices for Southern Minnesota hotels

A spacious interior with a herringbone wood floor, a kitchen area with granite countertops, and a staircase with patterned carpet.

A hotel reception desk with a computer, a lamp, and a fireplace.

A hotel room with a large bed, two bedside tables with lamps, a wooden door, and three framed pictures on the wall.

The entrance to AmericInn by Wyndham, featuring a stone facade, a blue sign with stars, and a number 240.

1. AmericInn by Wyndham Mankato Event Center

Mankato

richard

₩107,039

₩118,679 total

includes taxes & fees

Oct 25 - Oct 26

A Comfort Inn & Suites building with a covered entrance, numbered 2000, and a parking lot with cars.

A modern hotel lobby with blue armchairs, round tables, and a patterned carpet.

A lobby with a blue sofa, red chairs, a TV mounted on a textured wall, and a fireplace below it.

A barn with a metal roof and a fenced area with a pond and rocks.

2. Comfort Inn & Suites North Mankato

Mankato

Amy

₩126,795

₩140,584 total

includes taxes & fees

Oct 28 - Oct 29

A hotel room with a desk, chairs, a television, a lamp, a mirror, and a bed.

A multi-story residential building with a visible entrance and a sign indicating a parking area.

A hotel room with a flat-screen TV mounted on the wall, a desk with a lamp, a chair, and a small kitchenette area.

A conference room with multiple tables and chairs, a flat-screen TV mounted on the wall, and a framed picture of a lake.

3. Villa inn

Owatonna

₩73,120

₩80,707 total

includes taxes & fees

Sep 29 - Sep 30

An outdoor patio area with yellow umbrellas, wicker furniture, and a sign for Centerstone Plaza Hotel.

A modern living room with a dark wall, a decorative light fixture, and a patterned wall art piece.

A restaurant interior with wooden tables, chairs, and a stone wall.

A modern reception area with a wooden reception desk, glass pendant lights, and a long hallway with seating.

4. Centerstone Plaza Hotel Soldiers Field - Mayo Clinic Area

Historic Southwest

Carrie

₩146,045

₩168,133 total

includes taxes & fees

Oct 2 - Oct 3

A modern dining area with high tables, chairs, and pendant lighting.

A reception desk with a large digital screen displaying a cityscape and the word "happy."

A hotel room with two beds, a desk with a computer, a chair, and a window with a view.

A swimming pool with a tiled deck, sun loungers, and a lifeguard chair.

5. Hampton Inn & Suites Rochester-North

Rochester

Dr. Tim

₩138,792

₩159,784 total

includes taxes & fees

Oct 18 - Oct 19

An indoor swimming pool with a curved design, surrounded by palm trees and a white pool ladder.

A hotel room with a large bed, a desk, a chair, and a view of the outdoors through the window.

A modern interior with a fireplace, a green armchair, and a patterned rug.

A modern hotel lobby with a reception desk, a digital information kiosk, and a patterned floor.

6. Treasure Island Resort & Casino

Welch

Bill

₩110,695

₩138,494 total

includes taxes & fees

Sep 29 - Sep 30

A restaurant with wooden tables and bar stools, a bar area with a counter, and multiple televisions mounted on the walls.

An indoor swimming pool with a slide, seating area, and a large frog statue.

A bar with wooden stools and a neon sign.

A hotel room with two beds, a desk, a chair, and a mirror.

7. AmericInn by Wyndham Rochester Near Mayo Clinic

Rochester

Jeanne

₩104,372

₩120,157 total

includes taxes & fees

Oct 29 - Oct 30

A hotel room with a bed, a desk, a microwave, and a refrigerator.

A swimming pool with lounge chairs and a pool ladder.

A spacious lobby with a stone wall, a flat-screen TV, a fireplace, a blue sofa, and a wooden coffee table.

A spacious lobby with a stone fireplace, blue sofas, and wooden paneling.

8. Comfort Suites and Conference Center

Worthington

Ross

₩185,670

₩205,860 total

includes taxes & fees

Oct 25 - Oct 26

A hotel lobby with a reception desk, a waiting area with chairs, a play area, and a view of the outside through the glass doors.

A hotel with a large '6' on the facade, two cars parked in front, and a covered entrance.

A modern hotel room with a wooden floor, a bed with a gray and white bedspread, a green accent wall, a desk with a chair, and a small seating area with a sofa.

A modern kitchen with a coffee machine, microwave, and a large window with a view. There are four chairs and a small table in the center.

9. Motel 6 Mankato, MN

Mankato

Debra

₩93,431

₩103,591 total

includes taxes & fees

Oct 4 - Oct 5

An indoor swimming pool with clear water, wooden flooring, and a ceiling with wooden beams and lights.

A gym with treadmills, an elliptical, and a water station.

A café with multiple tables and chairs, a kitchen area with appliances, and a clock on the wall.

A room with a TV mounted on the wall, a wooden table, and two patterned armchairs.

10. Med City Inn & Suites - Mayo Clinic Area

Kutzky Park

₩96,681

₩111,303 total

includes taxes & fees

Sep 30 - Oct 1

A hotel with a stone facade, multiple windows, and a covered entrance.

A hotel room with a large window, a sofa, two beds, and a desk.

A modern living room with a stone wall, comfortable seating, a flat-screen TV, and decorative vases.

11. Cobblestone Hotel & Suites - Austin

Austin

Kevin

₩145,021

₩160,796 total

includes taxes & fees

Oct 11 - Oct 12

A hotel room with a large bed, a desk with a chair, a window with a view of the outdoors, and two bedside lamps.

A hotel room with a flat-screen TV mounted on the wall, a desk with a chair, a lamp, and a view of the city through the window.

A swimming pool with a clear blue water surface, surrounded by a tiled deck and a few chairs.

A hotel room with a desk, a television mounted on the wall, a microwave, a lamp, a chair, and a refrigerator.

12. Comfort Inn & Suites Rochester South Mayo Clinic

Rochester

Darlene

₩115,854

₩133,377 total

includes taxes & fees

Oct 29 - Oct 30

A self-service breakfast station with a waffle maker, coffee machines, and a variety of condiments.

A hotel room with a large bed, a desk, a chair, a television, and a window with curtains.

A hotel lobby with leather sofas, a stone fireplace, and a patterned carpet.

A reception area with a wooden reception desk, a red doormat, and framed awards on the wall.

13. Econo Lodge Mayo Clinic Area

Rochester

Ashley

₩95,530

₩109,979 total

includes taxes & fees

Oct 25 - Oct 26

A hotel room with a bed, desk, and window.

A Microtel hotel with a modern design, featuring multiple floors and a parking lot.

A modern hotel lobby with a reception desk, seating area, and large windows.

A modern, compact living space with a grey sofa, a wooden dining table, and a kitchen area with a microwave.

14. Microtel Inn & Suites by Wyndham New Ulm

New Ulm

Cathy

₩104,372

₩115,723 total

includes taxes & fees

Sep 30 - Oct 1

A hotel entrance with a stone facade, a glass door, and a metal roof structure.

A spa area with a hot tub, exercise equipment, and a seating area with chairs and a table.

A hotel room with a kitchenette, a dining area with striped chairs, a sofa, a TV, and a window with curtains.

An outdoor patio area with brick walls, a large arched window, and outdoor seating.

15. Aspen Suites

Rochester

Dana

₩191,961

₩232,045 total

includes taxes & fees

Oct 2 - Oct 3

An outdoor patio area with a fire pit, seating, and a pergola.

An indoor swimming pool with wooden walls and tiled flooring, surrounded by seating areas and doors.

A Country Inn & Suites building with a covered entrance, multiple windows, and a flagpole.

A modern living room with a sectional sofa, red armchairs, a coffee table, and a fireplace.

16. Country Inn & Suites by Radisson, Albert Lea - Austin

Albert Lea

Moss

₩110,113

₩122,089 total

includes taxes & fees

Oct 25 - Oct 26

A courtyard with rows of white chairs and tables, a pool, and a Marriott hotel building in the background.

A Courtyard by Marriott hotel with outdoor seating, a water feature, and a well-maintained garden.

A Courtyard by Marriott hotel courtyard with outdoor seating, a water feature, and a pergola with string lights.

A modern bar area with a central island, bar stools, and a variety of beverages.

17. Courtyard Mankato Marriott

Mankato

Diane

₩145,021

₩160,792 total

includes taxes & fees

Oct 11 - Oct 12

A Comfort Inn hotel with a stone facade, a covered entrance, and a parking area.

A hotel room with a blue sofa, a wooden coffee table, a bed with white linens, a TV, and a large mirror.

A spacious lobby with a central seating area, a reception desk, and a fireplace.

A spacious living room with a stone fireplace, blue sofas, and a flat-screen TV.

18. Comfort Inn & Suites West - Medical Center

Rochester

yuan

₩120,621

₩138,863 total

includes taxes & fees

Oct 10 - Oct 11

A hotel lobby with a stone wall, a coffee station, a refrigerator, and blue chairs.

A modern kitchen with a curved counter, a coffee machine, and a fruit display.

A gym with treadmills, elliptical machines, and dumbbells.

An indoor swimming pool with clear blue water, surrounded by yellow chairs and a tiled floor.

19. Fairfield Inn & Suites Mankato

Mankato

George

₩141,798

₩157,218 total

includes taxes & fees

Oct 4 - Oct 5

A reception area with a wooden reception desk, a "Welcome to the Bread & Butter State" sign, and a "Please Center" sign.

A modern lounge area with seating arrangements, a reception desk, and a patterned wall.

A coffee station with four coffee dispensers, a stack of disposable cups, and a tray with various coffee-related items.

A hotel room with a bed, a desk, a chair, a TV, and a bathroom visible through an open door.

20. Hampton Inn Rochester-South

Rochester

dennis

₩143,234

₩164,897 total

includes taxes & fees

Oct 11 - Oct 12

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Vacation Rentals in Southern Minnesota

Aparthotel

A spacious living area with a modern staircase, leather sofas, and contemporary lighting.

A modern pool table in a spacious, well-lit room with large windows and a bar area.

A modern interior with a large dining table, sofas, and a kitchen area.

A rooftop pool area with lounge chairs and umbrellas, surrounded by a modern building with a brick facade.

The Berkman

Folwell

"Excellent service and wonderful room!"

Apartment

A wooden interior with a kitchen, bar area, and a staircase.

A cafe with outdoor seating, a large tree, and a view of the water.

A wooden cabin interior with a bed, a ceiling light, and a window.

A modern kitchen with stainless steel appliances, wooden cabinets, and a stone tile floor.

Steps to Marina & Beach: Couples Cottage in Pepin

Pepin

"Great location and very well furnished with new appliances."

Apartment

A two-story building with a green exterior, a covered porch, and a driveway leading to a garage.

A room with a large window, a flat-screen TV mounted on the wall, a fluffy chair, a small round table, and a chair with a basket.

A bed with a white blanket and patterned pillows, a framed picture on the wall, and a window with a view.

A cozy room with a sofa bed, a small side table, and a window with blinds.

Northfield Apt Close to Downtown: Winter Walk

Northfield

"It was amazing!"

Cottage

A modern kitchen with white cabinets, a central island, and pendant lighting.

A modern living room with a grey sofa, a coffee table, and a TV mounted on the wall.

A single-story house with a garage, a well-maintained lawn, and an American flag.

A hot tub with a wooden exterior, surrounded by wicker furniture and a concrete patio.

Mankato Getaway w/ Game Room & Salt Water Hot Tub!

Mankato

"Very beautiful property. It had everything we needed and more. "

Apartment

A bedroom with a bed, a chair, a table, a fireplace, and a ceiling fan.

A kitchen with wooden cabinets, stainless steel appliances, and a dining table with chairs.

A wooden deck with Adirondack chairs lined up against a building with a flag.

A single-story house with a front porch, a small staircase leading to a deck, and a stone retaining wall.

Pet-friendly Wabasha Studio: Boat, Ski & Explore!

Wabasha

"Great property! Very convenient location as well."

Cottage

A modern interior with a stone fireplace, wooden walls, a leather sofa, and a dining area.

A cozy interior with a wooden ceiling, a fireplace, a red sofa, a leather couch, and a foosball table.

A bedroom with a wooden bed, a desk, a lamp, and large windows with a view of trees.

A log cabin interior with a wooden ceiling, a red sofa, a brown leather couch, and a person seated on a chair.

Pet-friendly Cabin Retreat: Walk to Lake Pepin!

Pepin

"What a fun place! Plenty of room. We played foosball had a fire outside. We enjoyed the fireplace too. We hadn’t anticipated no TV though. You might want to add that to your description. The water is definitely smelly, so we truly appreciated the 40 bottles of water you provided. Definitely a great place for a girl’s weekend or family reunion!"

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Stay near popular Southern Minnesota attractions

Forestville Mystery Cave State Park

9.0/10 (22 reviews)

Commune with nature and explore the great outdoors at Forestville Mystery Cave State Park during your travels in Preston. Wander the parks or discover the area's countryside.

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Mayo Civic Center

9.2/10 (818 reviews)

Catch an event at Mayo Civic Center during your trip to Rochester. Attend a sporting event or simply visit the area's shops.

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Mayo Clinic Health System Event Center

8.8/10 (246 reviews)

Catch an event at Mayo Clinic Health System Event Center during your trip to Mankato. Discover the coffeehouses and its entertainment venues while you're in the area.

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Apache Mall

8.6/10 (1,101 reviews)

During your visit to Rochester, you can do some window-shopping at Apache Mall. Attend a sporting event or simply enjoy the top-notch restaurants while you're in the area.

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Rochester Recreation Center

8.0/10 (205 reviews)

Catch an event at Rochester Recreation Center during your trip to Rochester. Attend a sporting event or simply enjoy the top-notch restaurants while you're in the area.

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Laura Ingalls Wilder Museum

9.0/10 (33 reviews)

You can spend time exploring the galleries in Laura Ingalls Wilder Museum during your travels in Walnut Grove. Take in the museums while you're in the area.

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National Volleyball Center

7.8/10 (151 reviews)

Catch an event at National Volleyball Center during your trip to Rochester. Attend a sporting event or simply enjoy the top-notch restaurants while you're in the area.

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Welch Village Ski Area

8.6/10 (16 reviews)

Hit the slopes in Welch with a visit to Welch Village Ski Area. Stroll along the area's riverfront or simply enjoy its coffeehouses.

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Learn more about Southern Minnesota

Discover the family-friendly area of Southern Minnesota—an opera house, a college vibe, and sights from Mount Kato Ski Area to Blakeslee Stadium.

See all hotels in Southern Minnesota

A cityscape with a river, a bridge, and a prominent building with a clock tower.

Top Southern Minnesota Hotel Reviews

Motel 6 Mankato, MN

10/10 Excellent

"For a Motel 6 it’s very clean and is newer. Have stayed twice and will stay again."

EVEN Hotel Rochester - Mayo Clinic Area by IHG

10/10 Excellent

"One of the cleanest hotels I’ve ever stayed in."

SpringHill Suites by Marriott Rochester-Mayo Clinic/St Marys

10/10 Excellent

"Had great help from staff."

Hyatt House Rochester/Mayo Clinic Area

10/10 Excellent

"."

AmericInn by Wyndham Rochester Near Mayo Clinic

8/10 Good

"very good restaurant attached with good food at a good price...and you get a 15% discount if you are also staying at the hotel."

Hotel Indigo Rochester – Mayo Clinic Area by IHG

8/10 Good

"Rooms were very clean and easy to manage. find the hotel was difficult"

Express Suites Riverport Inn & Suites

10/10 Excellent

"Friendly staff, quiet environment. My son particularly liked the pool."

Brentwood Inn & Suites

8/10 Good

"Walking distance to Mayo—very handy amidst construction."

Kahler Grand Hotel

10/10 Excellent

"Love the 40’s vibes that this modern hotel has."

More cheap stays in Southern Minnesota

Birch Hill Suite Rochester – Med City

3595 Commercial Drive SW Rochester MN

₩78,590

₩90,479 total

Oct 4 - Oct 5

includes taxes & fees

7.8/10 Good! (85 reviews)

Motel 6 Mankato, MN

1731 Premier DR Mankato MN

₩93,431

₩103,591 total

Oct 4 - Oct 5

includes taxes & fees

9.4/10 Exceptional! (1,006 reviews)

Med City Inn & Suites - Mayo Clinic Area

435 16th Ave Nw Rochester MN

₩96,681

₩111,303 total

Sep 30 - Oct 1

includes taxes & fees

7.8/10 Good! (1,029 reviews)

Boarders Inn & Suites by Cobblestone Hotels - Faribault

1801 Lavender Dr Faribault MN

₩103,573

₩114,311 total

Sep 30 - Oct 1

includes taxes & fees

Country Inn & Suites by Radisson, Albert Lea - Austin

2214 E Main St Albert Lea MN

₩110,113

₩122,089 total

Oct 25 - Oct 26

includes taxes & fees

8.8/10 Excellent! (1,013 reviews)

Brentwood Inn & Suites

123 Fourth Ave. NW Rochester MN

₩126,944

₩146,145 total

Oct 2 - Oct 3

includes taxes & fees

8.8/10 Excellent! (1,007 reviews)

Hotels in Southern Minnesota with star-rating

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Book Hotels in Southern Minnesota on Expedia.com

Find hotels in Southern Minnesota, MN from ₩90,479

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in Southern Minnesota

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for Southern Minnesota hotels

1. AmericInn by Wyndham Mankato Event Center

2. Comfort Inn & Suites North Mankato

3. Villa inn

4. Centerstone Plaza Hotel Soldiers Field - Mayo Clinic Area

5. Hampton Inn & Suites Rochester-North

6. Treasure Island Resort & Casino

7. AmericInn by Wyndham Rochester Near Mayo Clinic

8. Comfort Suites and Conference Center

9. Motel 6 Mankato, MN

10. Med City Inn & Suites - Mayo Clinic Area

11. Cobblestone Hotel & Suites - Austin

12. Comfort Inn & Suites Rochester South Mayo Clinic

13. Econo Lodge Mayo Clinic Area

14. Microtel Inn & Suites by Wyndham New Ulm

15. Aspen Suites

16. Country Inn & Suites by Radisson, Albert Lea - Austin

17. Courtyard Mankato Marriott

18. Comfort Inn & Suites West - Medical Center

19. Fairfield Inn & Suites Mankato

20. Hampton Inn Rochester-South

Vacation Rentals in Southern Minnesota

The Berkman

Steps to Marina & Beach: Couples Cottage in Pepin

Northfield Apt Close to Downtown: Winter Walk

Mankato Getaway w/ Game Room & Salt Water Hot Tub!

Pet-friendly Wabasha Studio: Boat, Ski & Explore!

Pet-friendly Cabin Retreat: Walk to Lake Pepin!

Stay near popular Southern Minnesota attractions

Forestville Mystery Cave State Park

Mayo Civic Center

Mayo Clinic Health System Event Center

Apache Mall

Rochester Recreation Center

Laura Ingalls Wilder Museum

National Volleyball Center

Welch Village Ski Area

Learn more about Southern Minnesota

Top Southern Minnesota Hotel Reviews

Motel 6 Mankato, MN

EVEN Hotel Rochester - Mayo Clinic Area by IHG

SpringHill Suites by Marriott Rochester-Mayo Clinic/St Marys

Hyatt House Rochester/Mayo Clinic Area

AmericInn by Wyndham Rochester Near Mayo Clinic

Hotel Indigo Rochester – Mayo Clinic Area by IHG

Express Suites Riverport Inn & Suites

Brentwood Inn & Suites

Kahler Grand Hotel

More cheap stays in Southern Minnesota

Birch Hill Suite Rochester – Med City

Motel 6 Mankato, MN

Med City Inn & Suites - Mayo Clinic Area

Boarders Inn & Suites by Cobblestone Hotels - Faribault

Country Inn & Suites by Radisson, Albert Lea - Austin

Brentwood Inn & Suites

Hotels in Southern Minnesota with star-rating

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