Nagasaki Prefecture Vacations & Trips from ₩483,926

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Top destinations in Nagasaki Prefecture

A mountainous landscape with a clear sky.

Tsushima

Tsushima
A brightly lit street with a wooden building adorned with lights and signs, a staircase, and a tree.

Nagasaki

Nagasaki
A coastal city with a harbor, mountains in the background, and dense urban development.

Sasebo

Sasebo

The Latest Nagasaki Prefecture Vacation Packages

Price found within the past 48 hours. Click for updated prices.
Matsuura City Hotel

Matsuura City Hotel

₩483,926
per person
Oct 23 - Oct 25
found 20 hours ago
Roundtrip flight included
Seoul (SEL) to Nagasaki (NGS)
8.8/10 Excellent! (12 reviews)
HOTEL R9 The Yard Sagakashima

HOTEL R9 The Yard Sagakashima

₩506,506
per person
Dec 10 - Dec 14
found 1 day ago
Roundtrip flight included
Seoul (ICN) to Nagasaki (NGS)
9.2/10 Wonderful! (5 reviews)
なし

Reviewed on Aug 8, 2026

Where to stay in Nagasaki Prefecture

Find the best Nagasaki Prefecture areas and neighborhoods for the activities you enjoy most.Learn more about Nagasaki Prefecture
Learn more about Nagasaki Prefecture
A traditional Chinese gate with intricate carvings and a lion statue.
A busy street with illuminated signs and traditional decorations.
A traditional Asian street with red pillars, a neon sign, and a statue.
A traditional Chinese gate with ornate decorations and a red banner with gold lettering.
A traditional Chinese gate with ornate roof design, a modern building with scaffolding, and a clear blue sky.

Nagasaki Chinatown

It’s bright and bold and provides an exciting perspective on the city. Walk through this area to experience various businesses and cultural aspects.

A pier with a wooden structure and stone bollards extending into the water.

Obama Onsen

While there might not be top attractions in Obama Onsen, you can explore the larger area and discover places like Unzen Jigoku Hell and Vidoro Museum.

A modern building with a glass facade and a sign for the Nagasaki Prefectural Art Museum.
A person walking on a sidewalk with a green umbrella, next to a building with vertical lines and the text "Matsushima Prefectural Art Museum".
A river with traditional Japanese buildings and modern skyscrapers in the background.
Photo by 上条ジョー
An art gallery with wooden paneling and several framed paintings on display.
A modern shopping mall with glass railings and a large glass wall.

Dejimamachi

While visiting Dejimamachi, you might make a stop by sights like Nagasaki Dejima and Nagasaki Prefectural Art Museum.

Nagasaki Prefecture Hotel Deals

Hotel Nikko Huis Ten Bosch

Hotel Nikko Huis Ten Bosch

6 Huis Ten Bosch Sasebo Nagasaki-ken
Fully refundableReserve now, pay when you stay
₩167,407
₩202,563 total
Sep 23 - Sep 24
8.8/10 Excellent! (1,332 reviews)
"Staff services"

Reviewed on Aug 2, 2026

Hotel Nikko Huis Ten Bosch
Hotel Okura JR Huis Ten Bosch

Hotel Okura JR Huis Ten Bosch

10 Huis Ten Bosch cho Sasebo Nagasaki
Fully refundableReserve now, pay when you stay
₩113,375
₩143,423 total
Sep 30 - Oct 1
Hotel Okura JR Huis Ten Bosch
Belleview Nagasaki Dejima

Belleview Nagasaki Dejima

1-20 Edo-machi Nagasaki Nagasaki
Fully refundableReserve now, pay when you stay
₩52,681
₩63,744 total
Sep 23 - Sep 24
8.8/10 Excellent! (1,002 reviews)
"A very friendly and wel ome staff and front desk with management care and hospitality. Lool.forward to future booking in a tranquility and peaceful hotel"

Reviewed on Sep 8, 2026

Belleview Nagasaki Dejima
See all 721 properties in Nagasaki Prefecture
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Frequently asked questions

How much does a Nagasaki Prefecture vacation package cost?
Choose from any combination of flights, hotels and car rentals, and you can be vacationing in Nagasaki Prefecture from just ₩483,926. And the more you bundle, the more you save. Your dream escape has never been more affordable.
How do I get a cheap travel package to Nagasaki Prefecture?
Just think of all the fun things you could do in Nagasaki Prefecture with a wad of extra cash in your pocket. Watch your savings stack up when you combine your hotel and flights into a Nagasaki Prefecture vacation package. You have loads of choice when you book your trip with Expedia too. In fact, you can choose from more than 550 air carriers and 1,000,000 hotels across the globe. Whether you're heading off with the entire family or surprising your special someone, exploring Nagasaki Prefecture is better with a package.
Where should I stay in Nagasaki Prefecture?
If you've always dreamed of exploring Nagasaki Atomic Bomb Museum and Glover Garden, Nagasaki is calling your name.
What are the top hotels in Nagasaki Prefecture?
Look up Quintessa Hotel Sasebo and Smile Hotel Sasebo. They're the first choice for many travelers headed to Nagasaki. If Sasebo is on your travel itinerary, Toyoko Inn Sasebo Ekimae and Hotel Resol Sasebo are both great options.
How far in advance should I book my Nagasaki Prefecture vacation?
To bag cheap prices, book ASAP. Airlines usually release tickets, along with some of the lowest fares, around a year in advance. Hotels, car rental and activities should also be booked well in advance so you can have the pick of the bunch. If you've decided on a last-minute getaway in Nagasaki Prefecture, there are always plenty of great deals on Expedia. Book your escape today!
What does an Expedia Nagasaki Prefecture travel package include?
That's up to you. You can select from a range of Nagasaki Prefecture bundles, such as a rental car, flight and hotel. You can also book a flight and a hotel, or a rental car with a flight. Once you've made your booking, you can add on the fun stuff like tours and activities. Whatever your Nagasaki Prefecture break looks like, you're sure to save!
What should I know before booking a Nagasaki Prefecture travel package?
A travel package can be easier on the bank balance than separately booking everything you need for your escape. For example, combine your hotels, flights and rental cars and save a packet. Whatever your vacation plans, you're sure to find a package that's perfect for you.
If I'm not able to travel, can I cancel my Nagasaki Prefecture vacation package?
It's difficult to predict what tomorrow might bring, so it's comforting to know that you can change or cancel your Nagasaki Prefecture vacation package. If your booking was made in the last 24 hours, you may be eligible for a refund. If it's an older booking, your airline, hotel or car rental company may charge a fee. Visit our Customer Service Portal for more information.

Stay near popular Nagasaki Prefecture attractions

A canal with a bridge, illuminated buildings, and trees with lights.

Huis Ten Bosch

9.0/10 (984 reviews)
Have a fun-filled day at Huis Ten Bosch and find out why this is a popular theme park in Sasebo. Stroll along the seaside or visit the spas while you're in the area.
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An indoor museum with brick walls, a staircase, and stone statues.

Nagasaki Atomic Bomb Museum

9.0/10 (545 reviews)
The atomic bomb’s shock factor never lessens with time. A walk through this building makes sure it’s not forgotten. Comprehend this horrific event by visiting here.
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A stone pathway leading uphill with wooden railings, surrounded by lush greenery and a mountainous backdrop.

Unzen Jigoku Hell

8.6/10 (113 reviews)
Learn about the local history of Unzen when you take a trip to Unzen Jigoku Hell. Discover the area's volcano viewpoints and countryside.
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A traditional building with a tiled roof, surrounded by a vibrant flower garden.

Glover Garden

8.4/10 (741 reviews)
Climb the hill and be treated to two features: a panoramic city view and estates of wealthy magnates. The harbor activity below is fascinating to watch.
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A traditional Japanese storefront with lanterns, signs, and a menu board.

Shianbashi Alley

7.0/10 (12 reviews)
During your trip to Nagasaki, you can find the perfect gifts to bring home at Shianbashi Alley. Stroll along the waterfront or experience the area's museums.
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A large bronze statue of a seated figure with arms raised, set against a backdrop of a blue sky with clouds and green trees.

Peace Park

8.6/10 (719 reviews)
At this spot, as reverent a place as you can find anywhere, reflect on one of the worst events to happen to humankind and the dire importance of it never being repeated.
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Nagasaki Dejima

8.2/10 (731 reviews)
Learn about the local history of Nagasaki when you take a trip to Nagasaki Dejima. Amble around the area's Chinatown or visit its shops.
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Intuji Port

7.0/10 (6 reviews)
Explore the waterfront in Iki with a trip to Intuji Port. Take in the museums and mountain views in the area.
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* Savings based on package bookings compared to the price of the same components booked separately. Savings not available on all packages.