The Best Hotels Closest to San Diego Natural History Museum in San Diego for 2026

The entrance to the Natural History Museum with a grand staircase leading up to the doors.

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Our top choices for San Diego Natural History Museum hotels

A narrow, enclosed walkway with wooden railings and a metal grid barrier, leading to a building entrance.

A modern bedroom with a large bed, a nightstand, a wall-mounted lamp, and a window with curtains.

An outdoor seating area with sofas and chairs, a wooden staircase, and potted plants.

A modern reception desk with a glass top, a large window offering a view, and a potted plant.

1. City24 Hotel Little Italy Mission Hills

2.3 km from San Diego Natural History Museum

Donavin

₩154,036

₩219,240 total

includes taxes & fees

Oct 26 - Oct 27

A hotel room with a herringbone-patterned floor, a bed, a chair, and curtains with room numbers.

A modern conference room with a wooden floor, white chairs, and a long table.

A modern office space with a reception desk, seating area, and plants.

2. Stay Classy Hostel

East Village, 2.3 km from San Diego Natural History Museum

Andrew

₩86,849

₩98,791 total

includes taxes & fees

Oct 13 - Oct 14

A rooftop pool with lounge chairs and a city skyline in the background.

A modern lobby with seating areas, large windows, and indoor plants.

A modern building with a sign reading "kasa little Italy" and a glass entrance.

A high-rise building with a view of a harbor and sailboats.

3. Kasa Little Italy San Diego

2.3 km from San Diego Natural History Museum

Victor

₩289,496

₩447,458 total

includes taxes & fees

Nov 9 - Nov 10

A modern bedroom with a brick wall, a bed, a desk, and a seating area.

A modern living room with a brick wall, a flat-screen TV, a round red rug, and a seating area with a sofa and chairs.

A building entrance with a large arched doorway, the number 432 above it, and a brick-paved area in front.

A cafe with outdoor seating, a sign reading "INFUSED DRINKS NATURE'S KITCHEN," and a "BREAKFAST @ Cafe21" sign.

4. Keating Hotel By At Mine Hospitality

East Village, 2.3 km from San Diego Natural History Museum

Jessica

₩94,472

₩212,656 total

includes taxes & fees

Oct 27 - Oct 28

A high-rise hotel with multiple floors, a prominent sign at the top, and a well-lit facade.

A spacious bar/lounge area with leather seating, a bar counter, and hanging pendant lights.

A spacious lobby with a high ceiling, leather seating, multiple tables, and a large flat-screen TV mounted on the wall.

A lobby with a purple-lit ceiling, a large wall mural, and seating areas.

5. Marriott Vacation Club®, San Diego

1.8 km from San Diego Natural History Museum

Veronica Dangerfield

₩249,288

₩289,037 total

includes taxes & fees

Oct 25 - Oct 26

A bar area with a glass ceiling, a central bar counter, and multiple stools.

A luxurious interior with a large chandelier, patterned sofas, and a view of a cityscape through a large window.

A checkered floor with round tables and chairs, a patterned ceiling, and large windows.

A dimly lit room with patterned walls, a wooden table, and a chair.

6. Lafayette Hotel & Club

2.6 km from San Diego Natural History Museum

katie

₩365,891

₩420,574 total

includes taxes & fees

Oct 19 - Oct 20

A luxurious room with a grand piano, plush blue sofas, ornate chandeliers, and elegant decor.

A luxurious lobby with a grand chandelier, plush blue sofas, and ornate decor.

A fountain with multiple water jets in a courtyard with seating and potted plants.

A rooftop terrace with white sofas, a fountain, and potted plants.

7. Westgate Hotel

2.3 km from San Diego Natural History Museum

Arlet

₩203,921

₩283,051 total

includes taxes & fees

Nov 8 - Nov 9

A spacious dining area with high ceilings, large chandeliers, and a modern interior design.

A rooftop pool area with lounge chairs and a view of the building's brick facade.

A multi-story hotel with a prominent 'PENDR' sign, large windows, and a corner entrance.

An outdoor dining area with wicker furniture and potted plants.

8. Pendry San Diego

Gaslamp Quarter, 2.8 km from San Diego Natural History Museum

Halil

₩395,377

₩531,913 total

includes taxes & fees

Nov 3 - Nov 4

A modern bar area with a curved counter, multiple bar stools, and a large window offering a view of the cityscape.

A rooftop lounge area with outdoor seating, a pool, and umbrellas.

A spacious lobby with a high ceiling, a large sectional sofa, multiple seating areas, and a modern chandelier.

An outdoor patio area with seating arrangements, including sofas, chairs, and round tables.

9. Omni San Diego Hotel at the Ballpark

Gaslamp Quarter, 3 km from San Diego Natural History Museum

James

₩262,477

₩364,935 total

includes taxes & fees

Oct 14 - Oct 15

A restaurant with outdoor seating, brick walls, and decorative lighting.

A spacious lobby with high ceilings, large windows, and elegant furniture.

A spacious lobby with a high ceiling, large windows, and a central chandelier.

A vintage car parked in front of a building with a sign that reads "Horton Grand Hotel."

10. The Horton Grand, Downtown/Gaslamp Quarter

2.8 km from San Diego Natural History Museum

Kelane

₩206,065

₩276,227 total

includes taxes & fees

Nov 8 - Nov 9

A rooftop lounge with a view of the city and ocean, featuring a sofa, chairs, and round tables.

A dining area with round tables set for a formal event, large windows offering a view of the city, and elegant floral arrangements.

A harbor with boats, a large building, and a parking area.

A modern hotel with a prominent yellow and blue facade, large windows, and a well-lit entrance area with palm trees.

11. Springhill Suites San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Rolando

₩249,288

₩289,623 total

includes taxes & fees

Nov 8 - Nov 9

A narrow hotel room with a kitchenette, a dining area, and a bed.

A modern kitchen with white cabinets, a black refrigerator, and a microwave.

A modern living room with a black leather sofa, a black armchair, a wooden coffee table with a plant, and a bench.

A modern kitchen with a dining area, wooden floors, and a large mirror.

12. The Artifact Inn

East Village, 2.3 km from San Diego Natural History Museum

Chris

₩117,005

₩305,624 total

includes taxes & fees

Oct 14 - Oct 15

A hotel room with two beds, a large mirror, a wooden headboard, and a carpeted floor.

A narrow alleyway with yellow buildings, a palm tree, and windows.

A hotel with a modern design, featuring a prominent 'Hotel Z' sign, a staircase, and a large window.

A modern living room with a wooden dining table, blue sofa, patterned chairs, and a large window with a view of the street.

13. Hotel Z

Gaslamp Quarter, 2.6 km from San Diego Natural History Museum

Sarah

₩172,693

₩246,822 total

includes taxes & fees

Oct 20 - Oct 21

A modern interior with a round table, two chairs, a hanging lamp, and a view of urban buildings through large windows.

A modern interior with a long wooden table, blue bar stools, a sofa, and large windows offering a view of the street.

A modern hotel room with a bed, a sofa, a dining area, and a kitchen.

A modern living room with a black leather sofa, two round tables, and a dining table with chairs. A large window offers a view of city buildings.

14. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

East Village, 2.5 km from San Diego Natural History Museum

Nathan

₩229,694

₩312,946 total

includes taxes & fees

Oct 25 - Oct 26

A multi-level interior with a staircase, wooden doors, and a balcony with plants.

A kitchen area with stainless steel appliances, a coffee machine, and a counter with various kitchen tools.

An outdoor dining area with tables and orange umbrellas, surrounded by buildings including the WM. PENN HOTEL.

A hotel lobby with a blue patterned carpet, a green leather sofa, a red leather sofa, and a wooden railing with plants.

15. Gaslamp Hostel

Gaslamp Quarter, 2.4 km from San Diego Natural History Museum

Karin

₩138,717

₩157,790 total

includes taxes & fees

Nov 2 - Nov 3

A hotel entrance with a stone archway, multiple windows, and potted plants.

A cozy lounge area with wooden furniture, a fireplace, and lush tropical plants.

A modern bedroom with a large bed, a decorative headboard, a nightstand, and a view of the city through large windows.

A variety of potted plants, including cacti and other greenery, arranged in front of a building with large windows.

16. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

Molly

₩266,712

₩309,239 total

includes taxes & fees

Oct 25 - Oct 26

A rooftop terrace with outdoor seating, a view of the city, and a large window overlooking the harbor.

A hotel room with a large window offering a city view, a beige sofa with a red pillow, a floor lamp, and a small white table.

A hotel room with a large window offering a view of a marina with boats and a cityscape.

17. Residence Inn by Marriott San Diego Downtown/Bayfront

2.8 km from San Diego Natural History Museum

Chen

₩317,039

₩367,509 total

includes taxes & fees

Nov 9 - Nov 10

An aerial view of a resort with multiple swimming pools, lounge areas, and palm trees.

A marina with numerous boats docked, a large ship in the background, and a modern building with balconies.

A bar area with a long counter, multiple stools, and hanging wicker lamps.

A modern hotel with a prominent circular tower and a glass facade.

18. Marriott Marquis San Diego Marina

3.1 km from San Diego Natural History Museum

Thomas Roy

₩381,974

₩506,216 total

includes taxes & fees

Oct 15 - Oct 16

A grand lobby with marble floors, a chandelier, and ornate doors.

A grand lobby with marble floors, ornate chandeliers, and a seating area with patterned upholstery.

A rooftop terrace with outdoor seating, umbrellas, and a view of the city skyline.

A hotel room with a large bed, a window with blinds, a bedside table with a lamp, and a framed picture on the wall.

19. Gaslamp Plaza Suites

Gaslamp Quarter, 2.2 km from San Diego Natural History Museum

Matthew

₩180,935

₩205,814 total

includes taxes & fees

Oct 25 - Oct 26

A swimming pool with a tiled edge, a blue lounge chair, and decorative wooden panels.

A hotel with multiple floors, a prominent sign, and a modern building in the background.

A modern interior with a sectional sofa, a glass coffee table, and large windows offering a view of the cityscape.

A hotel room with a large bed, a sofa, two chairs, a small table, and a framed picture on the wall.

20. Best Western Plus Bayside Inn

2.3 km from San Diego Natural History Museum

Mariusz

₩203,315

₩235,336 total

includes taxes & fees

Oct 25 - Oct 26

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Compare popular hotels close to San Diego Natural History Museum

Property	Property class	Guest rating
City24 Hotel Little Italy Mission Hills	9.6 Exceptional 223 reviews	View
Stay Classy Hostel	9.6 Exceptional 971 reviews	View
Kasa Little Italy San Diego	9.6 Exceptional 544 reviews	View
Keating Hotel By At Mine Hospitality	9.4 Exceptional 200 reviews	View
Marriott Vacation Club®, San Diego	9.4 Exceptional 1,248 reviews	View

Top San Diego Natural History Museum Hotel Reviews

Hampton Inn San Diego-Downtown

10/10 Excellent

"Clean room very spacious location was wonderful"

Wyndham San Diego Bayside

8/10 Good

"Ok"

The Sofia Hotel

10/10 Excellent

"Coziness, attentiveness of staff, comfortable beds"

The DEXTRO Little Italy, BW Premier Collection

10/10 Excellent

"Staff were friendly, room was clean but had an almost empty roll of toilet paper and no spare so we had to ask for one. There was a loud humming noise coming from the bathroom walls that woke me up in the middle of the night, maybe the pipes? Breakfast buffet was nice, enjoyed the variety of food options. Pool was also nice and clean too."

The Westin San Diego Gaslamp Quarter

10/10 Excellent

"."

Marriott Marquis San Diego Marina

8/10 Good

"The hotel is clean and the staff were friendly. The self parking becomes a challenge when there’s a convention going on."

The Neon Elm Hotel

10/10 Excellent

"comfortable beds, clean room, amazing decor -- take time to review each offering (room number) within your booking type as every room is unique and wonderful"

Uptown Inn by Vantaggio - Limited Service Apart-Hotel

8/10 Good

"It’s not clear where to pull over if arriving by car and right in front of hotel is a no stopping zone. You need to pull into unmarked driveway just before hotel with a no unauthorized vehicle sign and then park temporarily while checking in"

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Fleet Science Center

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A blue sign with yellow text reading "SPANISH ART CENTER" above a tiled wall.

Spanish Village Art Center

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A detailed model of a town with a church, train tracks, and a bridge.

San Diego Model Railroad Museum

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A symmetrical garden with a central reflecting pool, palm trees, and classical architecture.

Casa de Balboa

You can learn about the history of San Diego when you stop by Casa de Balboa. Stroll along the area's beautiful beaches or experience its fascinating museums.

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A gallery with classical paintings on display.

Museum of Photographic Arts

Visit this museum to journey through the history of the photography medium, which both captures the real world and transforms it into art.

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A desert landscape with large cacti and sparse trees.

Desert Garden

No other garden is as natural to San Diego as this slightly secluded area. Stroll through this green space to see plant species not commonly found in other parks.

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A garden with a pond, colorful flowers, palm trees, and a large building with a dome.

Botanical Building

Discover thousands of plants inside the historic centerpiece of San Diego’s Balboa Park, which was originally built for the 1915 Panama–California Exposition.

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A museum interior with classical paintings, a central bench, and a pink wall.

Timken Museum of Art

View a priceless collection of masterpieces from Europe, the U.S. and Russia in this gorgeous community museum, known as San Diego’s jewel box of art.

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Frequently asked questions

What's the area like around San Diego Natural History Museum?

San Diego Natural History Museum is located in an area of San Diego known for its beautiful ocean views, array of dining options, and popular zoo. If you're looking for a convenient place to stay, check out the 102 hotels and other accommodations you'll find within a mile.

What's the best place to stay close to San Diego Natural History Museum?

The Neon Elm Hotel is one of the top choices for your stay based on our traveler data, and this hotel offers free WiFi and in-room refrigerators. It's located just a short 1 mi (1.5 km) from San Diego Natural History Museum. Other good choices within a few miles include Wyndham San Diego Bayside and Best Western Seven Seas.

How many hotels can I expect to find near San Diego Natural History Museum?

Expedia has 102 hotels and other accommodations within a mile from San Diego Natural History Museum.

If I need to cancel the hotel reservation for my stay near San Diego Natural History Museum, will I receive a refund?

Yes! The majority of room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is often 24 or 48 hours before the scheduled arrival. If you have a reservation that's non-refundable, you might still have the option to cancel and be given a refund within a 24-hour period of your booking. Put your dates in and click on "Search", then use the "fully refundable" filter to review the best deals near San Diego Natural History Museum.

Where can I learn more about changing or cancelling my trip in the area near San Diego Natural History Museum?

To find more details about picking new dates or cancelling your stay near San Diego Natural History Museum, go to https://www.expedia.com/service/.

What can I see and do near San Diego Natural History Museum?

San Diego Air and Space Museum, Maritime Museum of San Diego, and USS Midway Museum feature a variety of fascinating exhibits to see while you're in town. Explore landmarks like Hotel del Coronado, Mission Basilica San Diego de Alcala, and Casa de Balboa. You can check out the local talent at Old Globe Theater, San Diego Civic Theatre, and The Rady Shell at Jacobs Park.

Find hotels near San Diego Natural History Museum, San Diego from ₩98,791

Change your mind

Treat yourself

Be picky

Check prices for these dates

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Star rating

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Our top choices for San Diego Natural History Museum hotels

1. City24 Hotel Little Italy Mission Hills

2. Stay Classy Hostel

3. Kasa Little Italy San Diego

4. Keating Hotel By At Mine Hospitality

5. Marriott Vacation Club®, San Diego

6. Lafayette Hotel & Club

7. Westgate Hotel

8. Pendry San Diego

9. Omni San Diego Hotel at the Ballpark

10. The Horton Grand, Downtown/Gaslamp Quarter

11. Springhill Suites San Diego Downtown/Bayfront

12. The Artifact Inn

13. Hotel Z

14. The Margot Hotel San Diego Gaslamp Quarter, Outset by Hilton

15. Gaslamp Hostel

16. Granger Hotel Gaslamp Quarter, A Member Of Design Hotels

17. Residence Inn by Marriott San Diego Downtown/Bayfront

18. Marriott Marquis San Diego Marina

19. Gaslamp Plaza Suites

20. Best Western Plus Bayside Inn

Compare popular hotels close to San Diego Natural History Museum

Top San Diego Natural History Museum Hotel Reviews

Hampton Inn San Diego-Downtown

Wyndham San Diego Bayside

The Sofia Hotel

The DEXTRO Little Italy, BW Premier Collection

The Westin San Diego Gaslamp Quarter

Marriott Marquis San Diego Marina

The Neon Elm Hotel

Uptown Inn by Vantaggio - Limited Service Apart-Hotel

Other attractions near San Diego Natural History Museum

Fleet Science Center

Spanish Village Art Center

San Diego Model Railroad Museum

Casa de Balboa

Museum of Photographic Arts

Desert Garden

Botanical Building

Timken Museum of Art

Frequently asked questions