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Top Pet-friendly San Juan Islands Hotels

Earthbox Inn & Spa

410 Spring Street Friday Harbor WA

13 min drive from Roche Harbor Marina

Enjoy hiking or biking trails near this city-center hotel, where dogs are treated to pet-friendly amenities, like a dog park. Fees apply for pets.

8.8/10 Excellent! (1,000 reviews)

Nice property and very helpful staff. They are helpful with local info and places to see etc. TV screen damaged- not their fault and said they would alert maintenance. Pretty close to ferry if you need to walk- it is an uphill 4 blocks but doable for us easily.

Reviewed on Mar 24, 2026

Tucker House Inn

275 C Street Friday Harbor WA

13 min drive from Roche Harbor Marina

Four-legged friends will appreciate the amenities, such as food and water bowls, during their stay (fees apply) at this pet-friendly bed & breakfast.

9.4/10 Exceptional! (284 reviews)

Yes the property welcomed our 18 lb. Havanese. However the Shaw Suite where we stayed was very disappointing. I would consider it very shabby…chipped paint on kitchen cabinets…old rickety dining chairs.. Ancient mattresses that were very saggy and uncomfortable…the bathroom is a horror…cracked and ...

Reviewed on Mar 10, 2026

Deer Harbor Inn

33 Inn Lane Deer Harbor WA

28 min walk from Roche Harbor Marina

Stay at this hotel in Deer Harbor. Enjoy free WiFi, free parking, and a garden. Popular attractions Skull Island State Park and West Sound Marina are located ...

8.4/10 Very Good! (201 reviews)

Parking was easy, and the property was quiet and gorgeous and the room was comfortable.

Reviewed on Mar 4, 2026

See all 564 properties in San Juan Islands

Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.