A traditional Japanese temple with red and white structures, surrounded by lush greenery and a crowd of visitors.

Boutique Hotels in Kyoto Prefecture from ₩75,084

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check availability on Kyoto Prefecture Boutique Hotels

This weekend
Aug 28 - Aug 30
Next weekend
Sep 4 - Sep 6

Our top choices for Kyoto Prefecture boutique hotels

Designer's Suite - Non Smoking | Premium bedding, down comforters, pillowtop beds, minibar

1. The Screen

The Screen
4.0 star property
Downtown Kyoto
9.4 out of 10, Exceptional, (409 reviews)
"Had a great stay here. The staff were very helpful and the location is great. Would recommend."
Canada
Navin
The price is ₩166,316
₩201,243 total
Aug 28 - Aug 29
The Screen
The Kanra Suite ,Annex Building,Non Smoking | Down comforters, in-room safe, blackout drapes

2. Hotel Kanra Kyoto

Hotel Kanra Kyoto
4.0 star property
Shimogyo Ward
9.8 out of 10, Exceptional, (1,000 reviews)
"Amazing hotel!"
United States
Anat
The price is ₩202,555
₩245,093 total
Aug 31 - Sep 1
Hotel Kanra Kyoto
View from property

3. Gagakuan

Gagakuan
4.0 star property
Shimogyo Ward
10.0 out of 10, Exceptional, (28 reviews)
"Spent four days at Gagakuan, satisfied, although unexpected cold weather even in spring. Late sakura blooming, still managed to view some. Did not follow tour, rather venture on our own. Visited places of interest but unable to cover all due to insufficient time, maybe next time would to come again. "
Malaysia
Tony
Gagakuan
Interior entrance

4. Noku Kyoto

Noku Kyoto
4.0 star property
Downtown Kyoto
9.4 out of 10, Exceptional, (1,000 reviews)
"Nicely located near transportation and sights."
United States
Mary
The price is ₩103,208
₩113,529 total
Sep 1 - Sep 2
Noku Kyoto
Lobby

5. Sakura Terrace The Gallery

Sakura Terrace The Gallery
3.0 star property
Minami Ward
9.2 out of 10, Wonderful, (1,241 reviews)
"Incredible place. Great location, staff is very polite and courteous. Many food options around."
United States
Jose
The price is ₩73,480
₩88,911 total
Aug 28 - Aug 29
Sakura Terrace The Gallery
Terrace/patio

6. Villa Sanjo Muromachi Kyoto

Villa Sanjo Muromachi Kyoto
4.0 star property
Downtown Kyoto
9.8 out of 10, Exceptional, (311 reviews)
"Love this boutique hotel! Beautiful, clean and quiet with the best bakeries nearby!"
United States
Sara
The price is ₩137,256
₩150,982 total
Aug 30 - Aug 31
Villa Sanjo Muromachi Kyoto
Terrace/patio

7. Mitsui Garden Hotel Kyoto Shinmachi Bettei

Mitsui Garden Hotel Kyoto Shinmachi Bettei
4.0 star property
Downtown Kyoto
9.4 out of 10, Exceptional, (1,011 reviews)
"Helpful and friendly staff, clean rooms, and well located."
Canada
Kurtis
The price is ₩99,530
₩109,483 total
Sep 1 - Sep 2
Mitsui Garden Hotel Kyoto Shinmachi Bettei
River view room with Tatami area 301 | Minibar (free items), in-room safe, desk, iron/ironing board

8. Aoi Hotel Kyoto

Aoi Hotel Kyoto
4.0 star property
Shimogyo Ward
9.8 out of 10, Exceptional, (132 reviews)
"Beautiful room and really nice staff."
United States
Julie
The price is ₩275,820
₩333,742 total
Sep 1 - Sep 2
Aoi Hotel Kyoto
Front of property - evening/night

9. kyoto ITOYA hotel

kyoto ITOYA hotel
3.0 star property
Shimogyo Ward
9.2 out of 10, Wonderful, (482 reviews)
"Everything was wonderful!!"
United States
Bruce
The price is ₩68,258
₩75,084 total
Aug 30 - Aug 31
kyoto ITOYA hotel
Lobby sitting area

10. Hotel The Celestine Kyoto Gion

Hotel The Celestine Kyoto Gion
4.5 star property
Gion
9.6 out of 10, Exceptional, (1,000 reviews)
"Fantastic stay with great location and exceptional staff service."
United States
Maria
The price is ₩255,852
₩281,436 total
Aug 31 - Sep 1
Hotel The Celestine Kyoto Gion
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top Kyoto Prefecture Hotel Reviews

Hotel Gracery Kyoto Sanjo

Hotel Gracery Kyoto Sanjo

10/10 Excellent
"The room was a good size for Japan. We really liked the washroom set up..the fact that the toilet was in a separate room and there was a Japanese style washing area. It was great to have a sliding door to separate the two spaces. Storage was ample. The location was great for shopping and the hotel was quiet. We liked the lounge area in the other part with free coffee and soft drinks. The washing machines were greatly appreciated. Although they had check in machines there was always staff at the front desk to help with inquiries. Would definitely stay here again. Good value!! I’m"
Kathie 1-night trip
Posted 2 hours ago
Hotel Gracery Kyoto Sanjo