A traditional Japanese temple with red and white structures, surrounded by lush greenery and a crowd of visitors.

Boutique Hotels in Kyoto Prefecture from ₩76,597

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check availability on Kyoto Prefecture Boutique Hotels

This weekend
Aug 28 - Aug 30
Next weekend
Sep 4 - Sep 6

Our top choices for Kyoto Prefecture boutique hotels

A modern bedroom with a large bed, bedside tables, a TV, and a large window with a view.

1. The Screen

The Screen
4.0 star property
Downtown Kyoto
9.4 out of 10, Exceptional, (409 reviews)
"Had a great stay here. The staff were very helpful and the location is great. Would recommend."
Canada
Navin
The price is ₩166,744
₩201,759 total
Aug 26 - Aug 27
The Screen
A narrow hallway with a bench, a television, and a balcony with a view.

2. Hotel Kanra Kyoto

Hotel Kanra Kyoto
4.0 star property
Shimogyo Ward
9.6 out of 10, Exceptional, (1,013 reviews)
"Amazing hotel!"
United States
Anat
The price is ₩187,327
₩226,666 total
Sep 1 - Sep 2
Hotel Kanra Kyoto
A traditional Japanese building with a tiled roof, a bicycle parked outside, and a potted plant.

3. Gagakuan

Gagakuan
4.0 star property
Shimogyo Ward
10.0 out of 10, Exceptional, (28 reviews)
"Spent four days at Gagakuan, satisfied, although unexpected cold weather even in spring. Late sakura blooming, still managed to view some. Did not follow tour, rather venture on our own. Visited places of interest but unable to cover all due to insufficient time, maybe next time would to come again. "
Malaysia
Tony
Gagakuan
A modern hallway with a wooden wall, a tiled floor, and a framed artwork on the wall.

4. Noku Kyoto

Noku Kyoto
4.0 star property
Downtown Kyoto
9.4 out of 10, Exceptional, (1,004 reviews)
"Nicely located near transportation and sights."
United States
Mary
The price is ₩128,293
₩141,122 total
Aug 26 - Aug 27
Noku Kyoto
A spacious lobby with a wooden ceiling, hexagonal stone flooring, and seating areas labeled "WATER TOWER LOUNGE" and "FRONT DESK."

5. Sakura Terrace The Gallery

Sakura Terrace The Gallery
3.0 star property
Minami Ward
9.2 out of 10, Wonderful, (1,241 reviews)
"Incredible place. Great location, staff is very polite and courteous. Many food options around."
United States
Jose
The price is ₩73,712
₩89,191 total
Aug 26 - Aug 27
Sakura Terrace The Gallery
A modern hotel entrance with large potted plants, a seating area, and a sign for Villa Sanjo Muramachi in Kyoto.

6. Villa Sanjo Muromachi Kyoto

Villa Sanjo Muromachi Kyoto
4.0 star property
Downtown Kyoto
9.8 out of 10, Exceptional, (311 reviews)
"Love this boutique hotel! Beautiful, clean and quiet with the best bakeries nearby!"
United States
Sara
The price is ₩126,224
₩138,846 total
Aug 27 - Aug 28
Villa Sanjo Muromachi Kyoto
A traditional Japanese garden with a rock arrangement, a stone lantern, and bamboo plants.

7. Mitsui Garden Hotel Kyoto Shinmachi Bettei

Mitsui Garden Hotel Kyoto Shinmachi Bettei
4.0 star property
Downtown Kyoto
9.4 out of 10, Exceptional, (1,011 reviews)
"Helpful and friendly staff, clean rooms, and well located."
Canada
Kurtis
The price is ₩99,845
₩109,829 total
Sep 1 - Sep 2
Mitsui Garden Hotel Kyoto Shinmachi Bettei
A traditional Japanese room with tatami flooring, a low wooden ceiling, and a central table with a chair.

8. Aoi Hotel Kyoto

Aoi Hotel Kyoto
4.0 star property
Shimogyo Ward
9.8 out of 10, Exceptional, (132 reviews)
"Beautiful room and really nice staff."
United States
Julie
The price is ₩275,608
₩333,486 total
Aug 29 - Aug 30
Aoi Hotel Kyoto
A hallway with a sign for Kyoto ITOYA hotel.

9. kyoto ITOYA hotel

kyoto ITOYA hotel
3.0 star property
Shimogyo Ward
9.2 out of 10, Wonderful, (482 reviews)
"Everything was wonderful!!"
United States
Bruce
The price is ₩69,634
₩76,597 total
Aug 27 - Aug 28
kyoto ITOYA hotel
A spacious indoor area with large windows, a long sofa, multiple chairs, and tables, providing a view of greenery outside.

10. Hotel The Celestine Kyoto Gion

Hotel The Celestine Kyoto Gion
4.5 star property
Gion
9.6 out of 10, Exceptional, (1,012 reviews)
"Fantastic stay with great location and exceptional staff service."
United States
Maria
The price is ₩262,658
₩288,927 total
Aug 26 - Aug 27
Hotel The Celestine Kyoto Gion
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top Kyoto Prefecture Hotel Reviews

Richmond Hotel Premier Kyoto Ekimae

Richmond Hotel Premier Kyoto Ekimae

10/10 Excellent
"The location was convenient, and everything made our stay relaxing and enjoyable. We truly appreciated the warm hospitality and attention to detail. We would happily stay here again and highly recommend this hotel to anyone looking for excellent service and a comfortable stay!”"
Tuyen 3-night trip
Posted 1 hour ago
Richmond Hotel Premier Kyoto Ekimae