A harbor with multiple sailboats and a bridge in the background.

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Nov 6 - Nov 8
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Nov 13 - Nov 15

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Our top choices for Harbor Island hotels

A balcony with wicker furniture overlooking a marina and a coastal cityscape.

1. Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
Harbor Island
8.6 out of 10, Excellent, (3,801 reviews)
"Amazing property! The hotel shuttle service was great! Would stay here again!"
United States
Monica
The price is ₩154,742
₩245,342 total
includes taxes & fees
Nov 22 - Nov 23
Sheraton San Diego Resort
A marina with boats docked, a balcony with chairs, and a view of the water.

2. Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
Harbor Island
8.8 out of 10, Excellent, (1,219 reviews)
"Excellent place to stay"
United States
Amos
The price is ₩206,740
₩237,638 total
includes taxes & fees
Nov 29 - Nov 30
Hilton San Diego Airport/Harbor Island
A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

3. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
0.7 km from Harbor Island
9.2 out of 10, Wonderful, (1,737 reviews)
"Love to stay here, very nice accommodations, quiet, great service, the airport shuttle very convenient."
United States
MANUEL
The price is ₩195,802
₩225,064 total
includes taxes & fees
Nov 22 - Nov 23
Hampton Inn & Suites San Diego Airport Liberty Station
A hotel complex with multiple buildings, a landscaped garden, and a body of water reflecting the sunset.

4. Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
1 km from Harbor Island
9.4 out of 10, Exceptional, (1,703 reviews)
"Very pleasant stay."
United States
Alicia
The price is ₩232,993
₩267,814 total
includes taxes & fees
Nov 15 - Nov 16
Homewood Suites by Hilton San Diego Airport/Liberty Station
A resort with two-story buildings, balconies, and a pool area.

5. Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
1.8 km from Harbor Island
9.2 out of 10, Wonderful, (3,157 reviews)
"Nice and brand new hotel, room was really clean, Staff were really nice to us."
United States
Yan
The price is ₩212,103
₩270,478 total
includes taxes & fees
Nov 23 - Nov 24
Humphreys Half Moon Inn
A balcony with a table set for two, overlooking a marina with numerous boats.

6. Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
2 km from Harbor Island
9.2 out of 10, Wonderful, (4,053 reviews)
"Beautiful, clean hotel and friendly staff!!"
United States
Robin
The price is ₩202,898
₩233,219 total
includes taxes & fees
Nov 2 - Nov 3
Bay Club Hotel & Marina
A modern hotel with a courtyard featuring outdoor seating, a chess table, and a well-maintained lawn.

7. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
3.4 km from Harbor Island
9.2 out of 10, Wonderful, (1,467 reviews)
"Everything about this place was great."
United States
Evelin
The price is ₩191,626
₩220,266 total
includes taxes & fees
Nov 8 - Nov 9
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
A hotel courtyard with outdoor seating, palm trees, and a view of the ocean at dusk.

8. Wyndham San Diego Bayside

Wyndham San Diego Bayside
4.0 star property
3.3 km from Harbor Island
8.4 out of 10, Very good, (6,364 reviews)
"Close to sites and staff was very kind and helpful"
United States
Sarah
The price is ₩187,091
₩263,345 total
includes taxes & fees
Nov 22 - Nov 23
Wyndham San Diego Bayside
A modern building with a sloped roof and large windows, surrounded by palm trees and a well-maintained garden.

9. Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
2.3 km from Harbor Island
9.0 out of 10, Wonderful, (1,631 reviews)
"Excellent location, great amenities and easy parking close to room."
Australia
Adam
The price is ₩197,309
₩226,797 total
includes taxes & fees
Nov 22 - Nov 23
Best Western Plus Island Palms Hotel & Marina
A hotel entrance with a stone archway, a reception desk, and potted plants.

10. Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
2.9 km from Harbor Island
9.2 out of 10, Wonderful, (1,098 reviews)
"The hotel was quite adequate for a night stay before an early flight. Proximity to the airport was key."
United States
JEFFREY
The price is ₩181,421
₩208,535 total
includes taxes & fees
Nov 8 - Nov 9
Holiday Inn Express San Diego Airport - Old Town by IHG
A hotel lobby with a waterfall feature, outdoor seating area, and multiple floors with balconies.

11. Crowne Plaza San Diego - Mission Valley by IHG

Crowne Plaza San Diego - Mission Valley by IHG
3.5 star property
4.4 km from Harbor Island
8.4 out of 10, Very good, (1,463 reviews)
"Great hotel"
United States
Thao
The price is ₩152,074
₩175,299 total
includes taxes & fees
Nov 23 - Nov 24
Crowne Plaza San Diego - Mission Valley by IHG
An outdoor seating area with fire pits, lounge chairs, and a modern building in the background.

12. Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area

Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
3.0 star property
4.3 km from Harbor Island
8.8 out of 10, Excellent, (1,746 reviews)
"Clean room, very friendly staff, great breakfast."
United States
Edith
The price is ₩175,752
₩202,019 total
includes taxes & fees
Nov 16 - Nov 17
Homewood Suites by Hilton San Diego Hotel Circle/SeaWorld Area
A building with a "Bienvenidos" sign, palm trees, and a well-maintained garden.

13. Old Town Inn

Old Town Inn
2.5 star property
3 km from Harbor Island
9.0 out of 10, Wonderful, (2,045 reviews)
"Great staff and great breakfast"
United States
Gene
The price is ₩181,515
₩208,288 total
includes taxes & fees
Nov 10 - Nov 11
Old Town Inn
A hotel room with a large window offering a city view, a bed, a chair, and a small table.

14. The DEXTRO Little Italy, BW Premier Collection

The DEXTRO Little Italy, BW Premier Collection
3.0 star property
4 km from Harbor Island
8.8 out of 10, Excellent, (2,340 reviews)
"Really enjoyed my stay!"
United States
Kelly
The price is ₩169,682
₩196,738 total
includes taxes & fees
Dec 1 - Dec 2
The DEXTRO Little Italy, BW Premier Collection
A hotel room with two beds, a desk, a chair, a TV, and a window with blinds.

15. Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
2 km from Harbor Island
7.8 out of 10, Good, (1,738 reviews)
"Great place! Better location and wonderful Staff"
United States
JJ
The price is ₩123,593
₩139,592 total
includes taxes & fees
Nov 30 - Dec 1
Comfort Inn San Diego Airport At The Harbor
A room with a large window overlooking a marina with boats and a bridge in the distance.

16. Hilton Garden Inn San Diego Downtown/Bayside

Hilton Garden Inn San Diego Downtown/Bayside
3.5 star property
3.2 km from Harbor Island
8.6 out of 10, Excellent, (1,462 reviews)
"Great place to stay very clean ."
United States
Geraldine Jocelyn Rodriguez
The price is ₩223,535
₩259,179 total
includes taxes & fees
Nov 22 - Nov 23
Hilton Garden Inn San Diego Downtown/Bayside
A hotel with a central courtyard, palm trees, and a fountain.

17. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.8 km from Harbor Island
8.8 out of 10, Excellent, (1,556 reviews)
"Nice hotel, close to everything."
United States
Sheri
The price is ₩166,681
₩191,591 total
includes taxes & fees
Nov 30 - Dec 1
Hilton Garden Inn San Diego Old Town/SeaWorld Area
A modern hotel lobby with a central seating area, a bar, and a large window providing natural light.

18. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
3.3 km from Harbor Island
7.4 out of 10, Good, (4,166 reviews)
"great stay"
United States
Sarah
The price is ₩127,955
₩147,079 total
includes taxes & fees
Nov 9 - Nov 10
Wyndham Garden San Diego Near SeaWorld
A modern interior with a sectional sofa, a glass coffee table, and large windows offering a view of the cityscape.

19. Best Western Plus Bayside Inn

Best Western Plus Bayside Inn
3.0 star property
3.7 km from Harbor Island
9.0 out of 10, Wonderful, (1,021 reviews)
"Very good location, good stay overall"
United States
Mariusz
The price is ₩191,439
₩221,590 total
includes taxes & fees
Nov 9 - Nov 10
Best Western Plus Bayside Inn
A spacious kitchen with a central island, wooden ceiling, and modern lighting fixtures.

20. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
3.7 km from Harbor Island
8.8 out of 10, Excellent, (1,012 reviews)
"Great place to rest your head"
United States
Kenneth
The price is ₩169,415
₩194,734 total
includes taxes & fees
Nov 9 - Nov 10
Holiday Inn Express San Diego - SeaWorld Area by IHG
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Compare top hotels in Harbor Island

A balcony with wicker furniture overlooking a marina and a coastal cityscape.

Sheraton San Diego Resort

4.0 star property
Harbor Island
View
A marina with boats docked, a balcony with chairs, and a view of the water.

Hilton San Diego Airport/Harbor Island

3.5 star property
Harbor Island
View
A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

Hampton Inn & Suites San Diego Airport Liberty Station

2.5 star property
0.7 km from Harbor Island
View
A hotel complex with multiple buildings, a landscaped garden, and a body of water reflecting the sunset.

Homewood Suites by Hilton San Diego Airport/Liberty Station

3.0 star property
1 km from Harbor Island
View
A resort with two-story buildings, balconies, and a pool area.

Humphreys Half Moon Inn

3.5 star property
1.8 km from Harbor Island
View
8.6
Excellent
3,801 reviews
8.8
Excellent
1,219 reviews
9.2
Wonderful
1,737 reviews
9.4
Exceptional
1,703 reviews
9.2
Wonderful
3,157 reviews
The price is ₩154,742
₩245,342 total
includes taxes & fees
Nov 22 - Nov 23
The price is ₩206,740
₩237,638 total
includes taxes & fees
Nov 29 - Nov 30
The price is ₩195,802
₩225,064 total
includes taxes & fees
Nov 22 - Nov 23
The price is ₩232,993
₩267,814 total
includes taxes & fees
Nov 15 - Nov 16
The price is ₩212,103
₩270,478 total
includes taxes & fees
Nov 23 - Nov 24
  • No Breakfast included
  • Yes, Pool
  • No Spa
  • Yes, Pet friendly
  • Yes, WiFi included
  • Yes, Parking
  • No Breakfast included
  • Yes, Pool
  • No Spa
  • Yes, Pet friendly
  • Yes, WiFi included
  • Yes, Parking
  • Yes, Breakfast included
  • Yes, Pool
  • No Spa
  • Yes, Pet friendly
  • Yes, WiFi included
  • Yes, Parking
  • Yes, Breakfast included
  • Yes, Pool
  • No Spa
  • Yes, Pet friendly
  • Yes, WiFi included
  • Yes, Parking
  • No Breakfast included
  • Yes, Pool
  • Yes, Spa
  • No Pet friendly
  • No WiFi included
  • Yes, Parking

Where to stay in Harbor Island

Find the best Harbor Island areas and neighborhoods for the activities you enjoy most.
A large stadium with the sign "Cobo Park" and palm trees around it.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

A pier extending into the ocean with buildings at the end, under a partly cloudy sky.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

A theater marquee with ornate designs and the name "Gaslamp Quarter".

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

A coastal cityscape with a long sandy beach, a pier, and dense urban buildings.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

Mission Bay

If you're spending some time in Mission Bay, Mission Bay and Ski Beach are top sights worth seeing.

Top Harbor Island Hotel Reviews

The Sofia Hotel

The Sofia Hotel

10/10 Excellent
"Great location within a short walking distance to the Gaslamp District. Clean and comfortable. Nice staff."
Dulce 4-night trip
Posted 3 hours ago
The Sofia Hotel

Frequently asked questions

What's it like in Harbor Island?
Harbor Island is a scenic neighborhood known for its beautiful island views and array of dining options. Consider a visit to San Diego Bay as part of your Harbor Island travel plans.
Where is the best hotel for a stay in Harbor Island?
Based on our traveler data, Sheraton San Diego Resort is one of the top choices for your stay in Harbor Island. This hotel is a short 1-minute walk from San Diego Bay, and it offers a marina and 3 outdoor pools.
How many hotels will I find in Harbor Island?
Book one of Expedia's 6 hotels and other accommodations in Harbor Island and start exploring everything San Diego has to offer.
If I need to cancel my hotel reservation in Harbor Island, will I receive a refund?
Yes, the majority of hotel bookings are fully refundable if you cancel before the accommodation's cancellation deadline, which is often 24 or 48 hours before your check-in date. If you have a reservation that's non-refundable, it may still be possible to cancel it and receive a refund within a 24-hour period of your booking. Enter dates in and click on "Search", then you can use the "fully refundable" filter to get the best deals in Harbor Island.
Where can I learn more about changing or cancelling my trip to Harbor Island?
For more information about rescheduling or cancelling your trip to Harbor Island, head over to our customer service page.
What is there to do around this San Diego neighborhood?
San Diego Bay is an attraction you might want to check out while you're in Harbor Island. While you're out sightseeing in San Diego, be sure to visit other sights like Marine Corps Recruit Depot or Port of San Diego.