Find hotels near Shelter Island, San Diego from ₩169,020

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
Next weekend

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Shelter Island hotels

Bay Club Hotel & Marina

Bay Club Hotel & Marina
3.5 star property
La Playa, 0.7 km from Shelter Island
9.2 out of 10, Wonderful, (3,446 reviews)
"We had great time and enjoyed our stay "
United States
sadra
The price is ₩194,765
₩223,873 total
includes taxes & fees
Mar 8 - Mar 9
Bay Club Hotel & Marina

Best Western Plus Island Palms Hotel & Marina

Best Western Plus Island Palms Hotel & Marina
3.0 star property
La Playa, 0.4 km from Shelter Island
8.8 out of 10, Excellent, (1,583 reviews)
"Great place.very clean great for family would definitely stay there again."
United States
Joseph
The price is ₩197,689
₩227,225 total
includes taxes & fees
Mar 9 - Mar 10
Best Western Plus Island Palms Hotel & Marina

Humphreys Half Moon Inn

Humphreys Half Moon Inn
3.5 star property
La Playa, 1 km from Shelter Island
9.2 out of 10, Wonderful, (2,793 reviews)
"Nice hotel "
United States
Timothy
The price is ₩269,045
₩338,500 total
includes taxes & fees
Mar 9 - Mar 10
Humphreys Half Moon Inn

Homewood Suites by Hilton San Diego Airport/Liberty Station

Homewood Suites by Hilton San Diego Airport/Liberty Station
3.0 star property
2.4 km from Shelter Island
9.4 out of 10, Exceptional, (1,429 reviews)
"Spacious rooms, great breakfast, clean hotel, would stay here again."
United States
Pamela
The price is ₩310,532
₩356,942 total
includes taxes & fees
Apr 4 - Apr 5
Homewood Suites by Hilton San Diego Airport/Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
2.7 km from Shelter Island
9.2 out of 10, Wonderful, (1,732 reviews)
"Clean, quiet, helpful staff and simple airport transfers. "
United States
Jill
The price is ₩256,060
₩294,328 total
includes taxes & fees
Apr 3 - Apr 4
Hampton Inn & Suites San Diego Airport Liberty Station

The Pearl Hotel

The Pearl Hotel
4.0 star property
1.6 km from Shelter Island
8.8 out of 10, Excellent, (1,006 reviews)
"Lovely spot would stay again "
United States
danixa
The price is ₩212,530
₩240,042 total
includes taxes & fees
Apr 1 - Apr 2
The Pearl Hotel

Sea Harbor Hotel

Sea Harbor Hotel
2.0 star property
1.4 km from Shelter Island
8.6 out of 10, Excellent, (1,007 reviews)
"Super clean rooms and a great location "
United States
Mark
Sea Harbor Hotel

TownePlace Suites by Marriott San Diego Airport/Liberty Station

TownePlace Suites by Marriott San Diego Airport/Liberty Station
3.0 star property
2.8 km from Shelter Island
9.0 out of 10, Wonderful, (1,000 reviews)
" The hotel is very clean, and the staff are friendly and helpful"
United States
Jun
The price is ₩251,352
₩288,916 total
includes taxes & fees
Apr 2 - Apr 3
TownePlace Suites by Marriott San Diego Airport/Liberty Station

Hilton San Diego Airport/Harbor Island

Hilton San Diego Airport/Harbor Island
3.5 star property
2.5 km from Shelter Island
8.8 out of 10, Excellent, (1,200 reviews)
"Friendly staff, clean rooms and beautiful views. Location was great for cruise port. "
United States
Claudia
The price is ₩254,247
₩292,244 total
includes taxes & fees
Mar 8 - Mar 9
Hilton San Diego Airport/Harbor Island

Best Western Yacht Harbor Hotel

Best Western Yacht Harbor Hotel
2.5 star property
1.7 km from Shelter Island
8.6 out of 10, Excellent, (1,758 reviews)
"Well stay again love the location"
United States
Lynette
The price is ₩147,682
₩169,469 total
includes taxes & fees
Mar 9 - Mar 10
Best Western Yacht Harbor Hotel

Kona Kai San Diego

Kona Kai San Diego
4.0 star property
La Playa, 0.2 km from Shelter Island
8.2 out of 10, Very Good, (1,001 reviews)
"Nice staff"
United States
Erika
The price is ₩279,573
₩409,080 total
includes taxes & fees
Mar 9 - Mar 10
Kona Kai San Diego

The Monsaraz San Diego, Tapestry Collection by Hilton

The Monsaraz San Diego, Tapestry Collection by Hilton
3.5 star property
1.6 km from Shelter Island
8.6 out of 10, Excellent, (681 reviews)
"Staff was very friendly and accommodating Rooms are clean and fresh Fun games in the courtyard "
United States
Lucas
The price is ₩241,126
₩277,163 total
includes taxes & fees
Apr 2 - Apr 3
The Monsaraz San Diego, Tapestry Collection by Hilton

DoubleTree by Hilton San Diego Bayside

DoubleTree by Hilton San Diego Bayside
3.0 star property
1.8 km from Shelter Island
8.2 out of 10, Very Good, (1,005 reviews)
"Staff were great. Room in the front building was great. "
United States
Gretchen S
The price is ₩226,612
₩260,478 total
includes taxes & fees
Mar 12 - Mar 13
DoubleTree by Hilton San Diego Bayside

Comfort Inn San Diego Airport At The Harbor

Comfort Inn San Diego Airport At The Harbor
3.5 star property
1.6 km from Shelter Island
7.8 out of 10, Good, (1,331 reviews)
"Spotless! Very kind and attentive staff at checkin! Very impressed and will be back! "
United States
Michelle
The price is ₩162,027
₩183,001 total
includes taxes & fees
Mar 10 - Mar 11
Comfort Inn San Diego Airport At The Harbor

Ramada by Wyndham San Diego Airport

Ramada by Wyndham San Diego Airport
3.0 star property
1.6 km from Shelter Island
7.4 out of 10, Good, (1,009 reviews)
"Very nice clean and friendly staff"
United States
ELIZABETH
The price is ₩147,294
₩169,020 total
includes taxes & fees
Mar 11 - Mar 12
Ramada by Wyndham San Diego Airport

Hotel Point Loma

Hotel Point Loma
2.0 star property
1.5 km from Shelter Island
7.4 out of 10, Good, (384 reviews)
"Great staff and very friendly "
United States
Nalani
Hotel Point Loma

Hotel Aqua Mar

Hotel Aqua Mar
2.0 star property
1.7 km from Shelter Island
6.4 out of 10, (1,001 reviews)
"Room and bathroom were very clean loved that had microwave refrigerator disappointed didn’t have coffee pot"
United States
Pedro
Hotel Aqua Mar

Sunrise Inn San Diego

Sunrise Inn San Diego
2.0 star property
1.2 km from Shelter Island
5.6 out of 10, (1,002 reviews)
"For the price and location this hotel is great. My go to when I’m down in San Diego and don’t want to break the bank "
United States
carmina
Sunrise Inn San Diego

Samesun Ocean Beach - Hostel

Samesun Ocean Beach - Hostel
2.0 star property
Ocean Beach, 4.3 km from Shelter Island
9.6 out of 10, Exceptional, (437 reviews)
"Clean rooms, decent staff, decent breakfast, good location"
United States
Minhaz
Samesun Ocean Beach - Hostel

The Inn at Sunset Cliffs

The Inn at Sunset Cliffs
2.5 star property
Ocean Beach, 3.6 km from Shelter Island
9.2 out of 10, Wonderful, (1,003 reviews)
"Great location, staff was so friendly and courteous, and amazing views!"
United States
Katrina
The price is ₩315,265
₩355,461 total
includes taxes & fees
Mar 9 - Mar 10
The Inn at Sunset Cliffs
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Shelter Island Hotel Reviews

Hotels near other Shelter Island attractions

Frequently asked questions

What's the area like around Shelter Island?
Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, check out the 41 hotels and other accommodations you'll find within a mile.
Where is the best place to stay near Shelter Island?
Adjacent to Shelter Island, Best Western Plus Island Palms Hotel & Marina is one of the top choices for your stay based on our traveler data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Bay Club Hotel & Marina and Humphreys Half Moon Inn.
How many hotels will I be able to find near Shelter Island?
Expedia has 41 hotels and other accommodations within a mile from Shelter Island.
If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?
Yes! The majority of hotel room reservations are fully refundable provided that you cancel before the accommodation's cancellation deadline, which often is within 24-48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and be given a refund within 24 hours of your booking. Put your dates in and click on "Search", then use the filter option "fully refundable" to view the top deals on offer near Shelter Island.
Where can I learn more about changing or cancelling my trip in the area near Shelter Island?
For more details about rescheduling or cancelling your stay near Shelter Island, click here.
What can I see and do near Shelter Island?
You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego, or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse, and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park, and San Diego Civic Theatre.