Photo by Shawn Blance

Find hotels in Clayton, NY from ₩89,521

Start date: Check-in selected.
To Date
End date: Check-out

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

Tonight
Dec 5 - Dec 6
Tomorrow
Dec 6 - Dec 7
This weekend
Dec 5 - Dec 7
Next weekend
Dec 12 - Dec 14

Filter by

Guest rating
Guest rating
Star rating

Compare 471 hotels, room rates, hotel reviews and availability. Most hotels are fully refundable.

Exterior
1000 Islands Harbor Hotel

1000 Islands Harbor Hotel

3.5 star property
Clayton
9.2 out of 10, Wonderful, (1000)
"Great place and location."
United States
DANIELA
The price is ₩149,187
₩165,603 total
includes taxes & fees
Jan 1 - Jan 2, 2026
1000 Islands Harbor Hotel
BBQ/picnic area
Chateau Country Inn

Chateau Country Inn

2.0 star property
Clayton
9.6 out of 10, Exceptional, (136)
"Enjoyable stay. Good breakfast Friendly staff"
United States
barton
The price is ₩174,497
₩193,692 total
includes taxes & fees
Dec 8 - Dec 9
Chateau Country Inn
Queen Room | Blackout drapes, rollaway beds, free WiFi, bed sheets
The Clipper Inn

The Clipper Inn

3.0 star property
Clayton
8.4 out of 10, Very Good, (276)
"Great place to stay. "
United States
Shannyn
The price is ₩146,016
₩162,078 total
includes taxes & fees
Dec 7 - Dec 8
The Clipper Inn
Exterior
Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

2.5 star property
Watertown
9.2 out of 10, Wonderful, (1003)
"Stuff was very friendly, room was very clean and breakfast was good."
Canada
Cheryl
The price is ₩127,867
₩141,931 total
includes taxes & fees
Dec 19 - Dec 20
Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG
Courtyard
Hilton Garden Inn Watertown/Thousand Islands

Hilton Garden Inn Watertown/Thousand Islands

3.0 star property
Watertown
9.2 out of 10, Wonderful, (978)
"Very good stay, food and drinks were very good as well"
United States
Christopher james
The price is ₩170,529
₩189,287 total
includes taxes & fees
Jan 2 - Jan 3, 2026
Hilton Garden Inn Watertown/Thousand Islands
Property grounds
The GillHouse

The GillHouse

2.0 star property
Henderson Harbor
9.2 out of 10, Wonderful, (5)
"Clean room "
United States
Byron
The price is ₩184,703
₩205,021 total
includes taxes & fees
Dec 6 - Dec 7
The GillHouse
Lobby
Fairfield Inn & Suites Watertown Thousand Islands

Fairfield Inn & Suites Watertown Thousand Islands

2.5 star property
Watertown
9.2 out of 10, Wonderful, (710)
"Nice clean hotel with friendly staff"
United States
Irina
The price is ₩177,430
₩196,949 total
includes taxes & fees
Dec 13 - Dec 14
Fairfield Inn & Suites Watertown Thousand Islands
Restaurant
Hampton Inn Watertown

Hampton Inn Watertown

2.5 star property
Watertown
9.0 out of 10, Wonderful, (1000)
"Great stay "
United States
David
The price is ₩139,597
₩154,964 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Hampton Inn Watertown
Desk, iron/ironing board, free cribs/infant beds, free WiFi
Comfort Inn & Suites Watertown - 1000 Islands

Comfort Inn & Suites Watertown - 1000 Islands

2.5 star property
Watertown
8.6 out of 10, Excellent, (1000)
"Friendly staff"
Canada
Dale
The price is ₩124,641
₩138,352 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Comfort Inn & Suites Watertown - 1000 Islands
Exterior
Ramada by Wyndham Watertown/Thousand Islands NY

Ramada by Wyndham Watertown/Thousand Islands NY

2.5 star property
Watertown
8.0 out of 10, Very Good, (1029)
"Perfectly located for all shopping and restaurants within walking distance if desired"
Canada
Steve
The price is ₩109,684
₩121,737 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Ramada by Wyndham Watertown/Thousand Islands NY
Lobby
Days Inn by Wyndham Watertown Fort Drum

Days Inn by Wyndham Watertown Fort Drum

2.0 star property
Calcium
8.8 out of 10, Excellent, (1000)
"Clean room / nice staff / parking / got tub"
United States
candy
The price is ₩92,919
₩103,140 total
includes taxes & fees
Dec 14 - Dec 15
Days Inn by Wyndham Watertown Fort Drum
Front of property - evening/night
Riveredge Resort

Riveredge Resort

3.5 star property
Alexandria Bay
8.4 out of 10, Very Good, (1000)
"Great stay with an amazing view!"
United States
Kyle
The price is ₩145,170
₩161,139 total
includes taxes & fees
Dec 18 - Dec 19
Riveredge Resort
Property grounds
Bonnie Castle Resort & Marina

Bonnie Castle Resort & Marina

3.0 star property
Alexandria Bay
7.0 out of 10, Good, (1000)
"Everything was wonderful!! The room was amazing and we'll definitely be back!!!"
United States
Constance
The price is ₩130,506
₩150,727 total
includes taxes & fees
Dec 18 - Dec 19
Bonnie Castle Resort & Marina
Lobby
Quality Inn & Suites Watertown Fort Drum

Quality Inn & Suites Watertown Fort Drum

2.5 star property
Calcium
8.4 out of 10, Very Good, (1005)
"Rooms are always clean, fresh , hot water within seconds , good clear tv and excellent in room coffee !"
Canada
Alan
The price is ₩81,016
₩89,927 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Quality Inn & Suites Watertown Fort Drum
Room, 1 Queen Bed | Premium bedding, free WiFi, bed sheets
Allen's Budget Motel

Allen's Budget Motel

2.5 star property
Watertown
8.8 out of 10, Excellent, (246)
"Stay was very comfortable and the staff was excellent "
United States
Randall
The price is ₩85,049
₩94,404 total
includes taxes & fees
Dec 13 - Dec 14
Allen's Budget Motel
Premium bedding, individually decorated, individually furnished, desk
Candlewood Suites Watertown Fort Drum by IHG

Candlewood Suites Watertown Fort Drum by IHG

2.5 star property
Evans Mills
8.4 out of 10, Very Good, (491)
"As usual the staff and room were top notch."
Canada
Ann
The price is ₩127,867
₩141,931 total
includes taxes & fees
Dec 13 - Dec 14
Candlewood Suites Watertown Fort Drum by IHG
Premium Room, 1 Queen Bed with Sofa bed | Free WiFi
Harbor House Inn

Harbor House Inn

2.5 star property
Sackets Harbor
9.2 out of 10, Wonderful, (300)
"Excellent hosts "
United States
Daniel
The price is ₩213,980
₩237,505 total
includes taxes & fees
Dec 7 - Dec 8
Harbor House Inn
Property entrance
Royal Inn Motel

Royal Inn Motel

2.0 star property
Watertown
7.2 out of 10, Good, (406)
"Clean, very nice people."
United States
Marek
The price is ₩83,583
₩92,777 total
includes taxes & fees
Dec 13 - Dec 14
Royal Inn Motel
Aerial view
Angel Rock Waterfront Cottages and Vacation Homes

Angel Rock Waterfront Cottages and Vacation Homes

3.0 star property
Cape Vincent
9.6 out of 10, Exceptional, (92)
"Beautiful property at a great location"
United States
Jeana
Angel Rock Waterfront Cottages and Vacation Homes
Deluxe Single Room, 1 Queen Bed | Desk, laptop workspace, free WiFi
Nest Inn

Nest Inn

2.0 star property
Watertown
7.8 out of 10, Good, (59)
"Nice place for the price"
Canada
Ryan
The price is ₩81,823
₩98,962 total
includes taxes & fees
Dec 7 - Dec 8
Nest Inn
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Stay near popular Clayton attractions

1000 Islands River Rat Cheese

4.6/5 (18 reviews)
You can search for that perfect souvenir at 1000 Islands River Rat Cheese during your trip to Clayton. Amble around the area's riverfront or seek out the local tours.
See properties

Clayton Marina

4.4/5 (83 reviews)
Explore the waterfront of Clayton Marina and enjoy other activities such as boating in Clayton. Amble around the area's riverfront or seek out the local tours.
See properties

Learn more about Clayton

Nestled along the St. Lawrence River, this charming village invites you to explore its historic downtown and scenic waterfront. Cruise the Thousand Islands, visit Boldt Castle on Heart Island, or cast a line for bass in one of Clayton's many fishing spots.

See all hotels in Clayton
French Bay
Photo by Shawn Blance
Open Photo by Shawn Blance

Top Clayton Hotel Reviews

Riveredge Resort

Riveredge Resort

10/10 Excellent
"Perfect location right next to river, beautiful view from balcony and friendly staff. Staff at front desk was helpful to provide is water bottles at midnight."
Pankaj 1-night trip
Posted 7 days ago
Riveredge Resort

More cheap stays in Clayton

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

Holiday Inn Express Hotel & Suites Watertown-Thousand Island by IHG

1290 Arsenal St Watertown NY
The price is ₩127,867 per night from Dec 19 to Dec 20
₩127,867
₩141,931 total
Dec 19 - Dec 20
includes taxes & fees
9.2/10 Wonderful! (1,012 reviews)

Frequently asked questions

Where is the best place to stay in Clayton?
1000 Islands Harbor Hotel is a favorite property for Expedia customers. This hotel offers a restaurant and an indoor pool. The Clipper Inn is another top choice for your trip based on reviews. See all available top hotels, or vacation rentals in Clayton.
If I need to cancel my hotel reservation in Clayton, will I receive a refund?
Yes! Most hotel bookings are fully refundable provided that you cancel prior to the hotel's cancellation deadline, which often is within 24-48 hours of your arrival date. If you have a non-refundable reservation, it might still be possible to cancel it and be given a refund within 24 hours of booking. Filter your search by fully refundable to find flexible hotel deals in Clayton.
Where can I learn more about changing or cancelling my trip to Clayton?
To access more information about picking new dates or cancelling your trip to Clayton, go to https://www.expedia.com/service/.
What's the best pet-friendly place to stay in Clayton?
The Clipper Inn is a top dog-friendly inn, and offers a restaurant along with free WiFi for its human guests. West Winds Motel & Cottages is another good option if you're bringing your pet along. See more pet-friendly hotel accommodations in Clayton.
Where is the best hotel to stay near Coyote Moon Vineyards?
1000 Islands Harbor Hotel is one of the top choices for your stay based on our traveler data, and this 3.5-star hotel offers a restaurant and an indoor pool. It's located 3.1 mi (5 km) from Coyote Moon Vineyards. Another good choice is The Clipper Inn, located 2.6 mi (4.2 km) away.
What about the best place to stay close to Clayton Island Tours?
One of the top choices for your stay is 1000 Islands Harbor Hotel, located next to Clayton Island Tours, and this 3.5-star hotel offers a restaurant and an indoor pool. Wooden Boat Inn and The Clipper Inn are two other good options within 5 miles.
What's the best hotel for a golf vacation in Clayton?
The Clipper Inn is a top inn that has an adjacent golf course and features free WiFi. Another good choice is Wooden Boat Inn if you'd like to be close to a golf course while in town. You can tee off at C-Way Golf Course during your trip. See more golf hotels in Clayton.
What are some accommodations with pools in Clayton?
1000 Islands Harbor Hotel: Features free self parking, an indoor pool, and complimentary wireless internet access. Another option with an onsite pool is West Winds Motel & Cottages. View all hotels with pools in Clayton.
What's the best place to stay near Macdonald-Cartier International Airport (YOW)?
Fairfield Inn & Suites by Marriott Ottawa Airport is a popular hotel, featuring free breakfast and an indoor pool. It's located a short 0.8 mi (1.3 km) from Macdonald-Cartier Intl. Airport. Other choices close to the airport are Hilton Garden Inn Ottawa Airport and Days Inn by Wyndham Ottawa Airport.
What's it like to stay in Clayton?
Visitors to Clayton are sure to enjoy the riverfront. Tourists can also enjoy so much more including its coffeehouses. In Clayton, there are 115 hotels and other accommodations to choose from. Find out more about Clayton.
What should I do while I'm visiting Clayton?
Cultural venues include Thousand Islands Museum, Antique Boat Museum, and The Clayton Opera House. Natural beauty is on display at Lake Ontario, Grenell Island, and Blind Bay. A couple of additional sights to add to your agenda are 1000 Islands River Rat Cheese and Clayton Marina. Check out what more to see and do in Expedia's Clayton guide.
What's the weather like in Clayton?
The hottest months are usually July and August with an average temp of 66°F, while the coldest months are January and February with an average of 26°F. The snowiest months in Clayton are January, February, March, and November, with each month seeing an average of 18 inches of snowfall.

Explore a world of travel with Expedia