A densely packed urban skyline with numerous high-rise buildings and a distinctive spherical structure.

Search Aparthotels in Shinjuku Station

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

In two weeks
Nov 6 - Nov 8
In two months
Dec 18 - Dec 20
In three months
Jan 15 - Jan 17
In four months
Feb 12 - Feb 14

Our top choices for Shinjuku Station aparthotels

A modern reception area with a curved reception desk, a glass partition, and a decorative wall with abstract designs.

1. MIMARU Tokyo Shinjuku West

MIMARU Tokyo Shinjuku West
3.0 star property
Shinjuku
9.6 out of 10, Exceptional, (634 reviews)
"Clean room , great location and the staff was very friendly and helpful."
United States
Nakita
The price is ₩520,635
₩576,074 total
Nov 5 - Nov 6
MIMARU Tokyo Shinjuku West
A modern reception area with a sofa, a reception desk, and a sign that reads "CAVA HOUSE".

2. Cava House

Cava House
3.5 star property
Shinjuku
9.6 out of 10, Exceptional, (27 reviews)
"It is well located, modern and has good size rooms. Staff is not very well trained, most of them dont have much clue about what exists around hotel etc. Overall good place to stay due to location and nice rooms."
Australia
Richa
The price is ₩392,652
₩431,917 total
Oct 26 - Oct 27
Cava House
A multi-story hotel with a modern facade, featuring a mix of yellow and blue panels, and a prominent 'Citadines' sign.

3. Citadines Shinjuku Tokyo

Citadines Shinjuku Tokyo
3.5 star property
Shinjuku
9.2 out of 10, Wonderful, (2,928 reviews)
"Everything was great, staff were friendly and helpful."
Canada
Patrick
The price is ₩256,575
₩310,455 total
Oct 29 - Oct 30
Citadines Shinjuku Tokyo
A room with a wardrobe, a bed, a nightstand, and a lamp.

4. Shinjuku16

Shinjuku16
4.0 star property
Shinjuku
9.6 out of 10, Exceptional, (50 reviews)
"Very cozy and very close to the train station!"
United States
matthew
The price is ₩240,464
₩264,510 total
Oct 22 - Oct 23
Shinjuku16
A hotel room with a bed, a ceiling fan, a window with curtains, and a built-in shelf.

5. HANAYADO SHINJUKU

HANAYADO SHINJUKU
2.0 star property
Shinjuku
7.4 out of 10, Good, (3 reviews)
"Spotless room. Everything great "
United Kingdom
Jennifer
The price is ₩134,658
₩224,116 total
Nov 2 - Nov 3
HANAYADO SHINJUKU
A modern hotel room with a large bed, a dining area with a wooden table and chairs, a kitchen area with wooden cabinets, and a large window providing natural light.

6. illi Nuto Shinjuku

illi Nuto Shinjuku
4.0 star property
Shinjuku
9.6 out of 10, Exceptional, (64 reviews)
"Loved this place!"
United States
Eric
The price is ₩470,109
₩517,120 total
Oct 23 - Oct 24
illi Nuto Shinjuku
A modern hotel room with a bed, bedside table, and a sofa.

7. Stay SAKURA Tokyo Shinjuku Hyaku kura

Stay SAKURA Tokyo Shinjuku Hyaku kura
2.5 star property
Shinjuku
8.8 out of 10, Excellent, (79 reviews)
"We loved our stay of 5 nights. Our family of four was in the one room and it was spacious enough. Two adults and 11yr old across the two singles and 14yr old on the sofa bed. The hotel is located in Koreatown of Japan and was extremely easy to get to Shinjuku and Shibuya. There was an abundance of great restaurants close by. It was extremely clean and had everything we needed."
Japan
Deborah
The price is ₩125,162
₩137,693 total
Nov 2 - Nov 3
Stay SAKURA Tokyo Shinjuku Hyaku kura
A modern hotel room with a bed, a TV mounted on the wall, a dining table with chairs, and a small coffee table.

8. M/W HOTEL

M/W HOTEL
4.0 star property
Shinjuku
9.0 out of 10, Wonderful, (91 reviews)
"Outstanding. Couldn't beat the location. The host was very communicative. Would go back for sure."
Canada
adrian
The price is ₩227,235
₩380,014 total
Oct 22 - Oct 23
M/W HOTEL
A modern living room with a sofa, a coffee table, and a large window with curtains.

9. illi Enu Yotsuya

illi Enu Yotsuya
3.5 star property
Shinjuku
9.8 out of 10, Exceptional, (53 reviews)
"Beautiful and comfy stay"
Canada
Ethan
The price is ₩273,734
₩301,107 total
Oct 23 - Oct 24
illi Enu Yotsuya
A bedroom with a bed, a window, a wall-mounted heater, and a ceiling light.

10. Shinjuku Topshot Hotel

Shinjuku Topshot Hotel
2.0 star property
Shinjuku
10.0 out of 10, Exceptional, (1 review)
"Nice and tiny rooms. Very clean and everything available for a night sleeps and nothing more. 7 when store and restaurant within walking distance"
Japan
AMIN ABDULLAH H
The price is ₩133,764
₩165,716 total
Nov 1 - Nov 2
Shinjuku Topshot Hotel
An outdoor seating area with wooden tables and chairs, a large umbrella, and a brick wall in the background.

11. KIZEN VILLA

KIZEN VILLA
4.5 star property
Nakano
9.6 out of 10, Exceptional, (30 reviews)
"Everything about Kizen Villa was magnificent. The hosts were so friendly and interesting. They love meeting people from all over the world and they do everything possible to ensure an enjoyable and pleasant stay. We had more space than we could have ever hoped for staying in Japan. The beds were extremely comfortable and the washer/dryer was very useful as well as the kitchen. I am so happy we stayed here."
United States
Shaunessi
The price is ₩349,024
₩387,620 total
Nov 19 - Nov 20
KIZEN VILLA
A rustic kitchen with wooden shelves, a vintage stove, and a blue barrel.

12. Apartment Hotel Shinjuku

Apartment Hotel Shinjuku
2.0 star property
Shinjuku
7.0 out of 10, Good, (47 reviews)
"The guys there were so nice and friendly. The location was better."
Australia
Paul
Apartment Hotel Shinjuku
A room with a green door, a white wall, a wooden floor, a desk with a chair, and a mirror.

13. Tokyo Candle house

Tokyo Candle house
Shinjuku
The price is ₩62,954
₩69,249 total
Oct 22 - Oct 23
Tokyo Candle house
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free

Top Shinjuku Station Hotel Reviews

Hotel Villa Fontaine Grand Tokyo - Shiodome

Hotel Villa Fontaine Grand Tokyo - Shiodome

10/10 Excellent
"Great location! Ginza is within walking distance, as well as the important stations for daily Excursions."
Andrea 5-night trip
Posted less than an hour ago
Hotel Villa Fontaine Grand Tokyo - Shiodome