A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

San Juan Island 3 Stars Hotels

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Check availability on San Juan Island 3 Star Hotels

Tonight
Oct 12 - Oct 13
Tomorrow
Oct 13 - Oct 14
This weekend
Oct 16 - Oct 18
Next weekend
Oct 23 - Oct 25

Our top choices for San Juan Island 3-star hotels

A two-story house with a red roof and white exterior, featuring a front porch with red chairs and a small tree.
A house with a red roof, surrounded by lush greenery and mountains in the background.
A spacious living area with a fireplace, patterned furniture, and large windows.
A two-story house with a balcony, a red door, and a view of the mountains.

1. Anacortes Ship Harbor Inn

Anacortes Ship Harbor Inn
Anacortes
United States
Traci
₩119,417
₩132,418 total
includes taxes & fees
Nov 1 - Nov 2
Anacortes Ship Harbor Inn
A wooden pier leading to a building with large windows and a flagpole.
A wooden boardwalk leading to a building with multiple windows and lights.
A wooden pier leading to a dock with boats, a grocer's shop, and a forested hillside in the background.
A restaurant with stone walls, wooden tables, and chairs. There are large windows allowing natural light.

2. Lopez Islander Resort

Lopez Islander Resort
Lopez Island
United States
Carolyn
₩239,907
₩264,742 total
includes taxes & fees
Oct 13 - Oct 14
Lopez Islander Resort
A living room with a sofa, armchairs, a coffee table, and a fireplace.
A building with a sign that reads "OFFICE Gift Shop" at the entrance.
A waterfront promenade with benches, a gazebo, and a large white boat docked at a pier.
A landscaped garden with neatly trimmed hedges, a white picket fence, and a wooden signboard.

3. Earthbox Inn & Spa

Earthbox Inn & Spa
Friday Harbor
United States
Ann
₩294,857
₩326,259 total
includes taxes & fees
Nov 1 - Nov 2
Earthbox Inn & Spa
A marina with boats docked in a structured layout, surrounded by water and a distant cityscape.
A restaurant with tables set for dining, large windows offering a view of boats and greenery.
A serene lakeside setting with string lights, wicker chairs, and a fire pit area.
A hotel with a large building, a pond in front, and trees around.

4. Roche Harbor Resort

Roche Harbor Resort
Friday Harbor
United States
Nicco
₩260,546
₩301,888 total
includes taxes & fees
Nov 1 - Nov 2
Roche Harbor Resort
A waterfront property with multiple buildings, including a large house with a prominent roof and a smaller structure with a chimney.
A hotel room with a bed, a TV mounted on the wall, a desk with a chair, and a large window offering a view of the sea and mountains.
A view from a porch with a white railing, overlooking a body of water, mountains, and a grassy area with trees and a fence.
A child walking on a gravel path towards a rustic wooden cabin surrounded by lush greenery and flowering plants.

5. Outlook Inn

Outlook Inn
Eastsound
United States
Corey
₩416,123
₩479,296 total
includes taxes & fees
Nov 1 - Nov 2
Outlook Inn
Two people relaxing by a fire pit with a view of a harbor and a large ship.
A bar area with a large TV screen displaying a landscape, a bookshelf with books and bottles, and leather chairs.
A bar area with shelves of bottles and glasses, a counter with a fruit bowl, and tables with chairs.
A couple in white bathrobes sitting on a bed with a textured headboard, two wall-mounted lamps, and a decorative wall piece.

6. Friday Harbor House

Friday Harbor House
Friday Harbor
United States
Randy
₩408,913
₩452,462 total
includes taxes & fees
Nov 1 - Nov 2
Friday Harbor House
A covered patio with a fire pit, outdoor furniture, and a view of a house in the background.
A living room with a fireplace, leather sofa, and a coffee table.
A hotel entrance with a sign, steps, and a flag.
A dining room with a large wooden table surrounded by chairs, a chandelier, and large windows with blinds.

7. Nantucket Inn

Nantucket Inn
Anacortes
United States
Elizabth
₩253,312
₩280,922 total
includes taxes & fees
Oct 15 - Oct 16
Nantucket Inn
An aerial view of a coastal marina with boats docked, surrounded by lush greenery and residential areas.
A wooden porch with two cushioned chairs, a hanging flower pot, and a sign thanking the carpenter family.
An aerial view of a residential area with houses, a large body of water, and a forested landscape.
A cozy cabin interior with a kitchen, dining area, and a fireplace.

8. Deer Harbor Inn

Deer Harbor Inn
Deer Harbor
United States
Nemo
₩320,054
₩353,185 total
includes taxes & fees
Oct 13 - Oct 14
Deer Harbor Inn
A wooden deck with a view of a lake and mountains.
A dining area with a round table, four chairs, and a potted plant.
A cozy living room with a dining table, chairs, a patterned armchair, and a wooden coffee table.
A living room with a sofa, a coffee table, a dining table, and a chandelier.

9. Landmark Inn on Orcas Island

Landmark Inn on Orcas Island
Eastsound
United States
Randall
Landmark Inn on Orcas Island
A rustic wooden sign with the text "Inn To The Woods" and a moon and stars design.
A wooden deck with wicker furniture, a table with a glass top, and potted plants.
A four-poster canopy bed with a brown bedspread, multiple decorative pillows, and a floral-patterned bench at the foot of the bed.
A cozy living room with a bookshelf, a sofa, a coffee table, and a chair.

10. Inn to the Woods B&B

Inn to the Woods B&B
Friday Harbor
United States
Terri
Inn to the Woods B&B
A wooden deck with a table and grill, overlooking a lake with a distant bridge.
A wooden cabin room with a large bed, a window with a view of the sea, and a framed picture on the wall.
A wooden cabin with a dining area and a patio overlooking a rocky shoreline.
A wooden cabin interior with a dining table, chairs, a sofa, and a ceiling fan.

11. West Beach Resort

West Beach Resort
Eastsound
United States
lorrie
₩249,288
₩275,088 total
includes taxes & fees
Nov 9 - Nov 10
West Beach Resort
A serene outdoor seating area with a table and chairs, surrounded by lush greenery and a tree.
A dining table set with plates of food, glasses, and a vase of flowers.
A spacious entryway with a wooden staircase, a patterned rug, and potted plants.
A two-story building with a red door, surrounded by a garden with various plants and flowers.

12. Trumpeter Inn

Trumpeter Inn
Friday Harbor
United States
Nina
₩295,862
₩326,487 total
includes taxes & fees
Oct 13 - Oct 14
Trumpeter Inn
A two-story building with a covered porch, surrounded by a variety of flowering plants.
A room with a bed, a TV, a table with chairs, a rug, and a balcony with chairs.
A living room with a grand piano, a fireplace, a sofa, and a chair.
A man seated at a piano with sheet music, surrounded by books and a vase of flowers.

13. Friday Harbor Grand B&B

Friday Harbor Grand B&B
Friday Harbor
United States
Andrew
₩343,777
₩380,389 total
includes taxes & fees
Oct 13 - Oct 14
Friday Harbor Grand B&B
A wooden deck with a railing, potted plants, and hanging flower baskets.
A house with a red exterior, a front porch, and a staircase leading to the entrance.
A dining area with a wooden table and chairs, a patterned rug, and a painting on the wall.
A cozy living room with a fireplace, a red velvet chair, and a stone wall.

14. Kangaroo House B&B on Orcas Island

Kangaroo House B&B on Orcas Island
Eastsound
United States
Ashlee
₩301,143
₩332,304 total
includes taxes & fees
Oct 20 - Oct 21
Kangaroo House B&B on Orcas Island
A wooden pier extending over calm water with a clear sky above.
A bar area with wooden shelves, stools, and a counter.
A spacious dining area with wooden tables and chairs, large windows offering views of the outdoors, and a fireplace.
A wooden deck with a glass door leading to a bedroom, a glass table, and a view of a lake with boats.

15. Kingfish at West Sound

Kingfish at West Sound
Eastsound
United States
Yoav
Kingfish at West Sound
A covered outdoor area with wicker furniture and umbrellas, a wooden deck, and a house with large windows.
A well-maintained garden with various shrubs and flowers, a clear sky, and a residential area in the background.
A modern kitchen with wooden cabinets, a built-in microwave, and a bar area with stools.
A living room with a sofa, coffee table, and a red door in the background.

16. Oak Harbor Hideaway - 5 Mi to Deception Pass!

Oak Harbor Hideaway - 5 Mi to Deception Pass!
Oak Harbor
Oak Harbor Hideaway - 5 Mi to Deception Pass!
A spacious deck with a sliding glass door leading to a patio area, a barbecue grill, and a dining table set with plates and placemats.
A modern living room with a blue sofa, wooden flooring, and a ceiling fan.
A modern kitchen with built-in cabinets, a microwave, a toaster, and an oven.
A kitchen with a wooden countertop, a sink, and a window. There is a dining table with chairs and a window with a view of trees.

17. Swan Lake Cottage by Avantstay Views + Firepit

Swan Lake Cottage by Avantstay Views + Firepit
Oak Harbor
United States
Vienna
Swan Lake Cottage by Avantstay Views + Firepit
A room with a large window overlooking a grassy area and a body of water. There is a round table with two chairs and a potted plant on it.
Outdoor wooden chairs arranged on a grassy area with a view of a lake and trees in the background.
A two-story house with large windows, a covered porch, and lush greenery.
A garden with a variety of plants and flowers, a gazebo, and a house with a butterfly sculpture in the foreground.

18. The Bluff on Whidbey B&B

The Bluff on Whidbey B&B
Oak Harbor
United States
Larry
The Bluff on Whidbey B&B
A log cabin with a porch, two chairs, a grill, and a stone fire pit.
A wooden cabin interior with a dining table, a sofa, a ladder, and a view of greenery outside.
A log cabin with a gravel driveway, surrounded by dense forest.
A log cabin interior with a leather sofa, a fireplace, and a view of the outdoors.

19. Penn Cove Overlook by Avantstay Cabin w/ Views

Penn Cove Overlook by Avantstay Cabin w/ Views
Oak Harbor
United States
Kathlynn Leilani
Penn Cove Overlook by Avantstay Cabin w/ Views
A bedroom with a large bed, a desk, and a view of the sea.
A residential area with houses, a grassy lawn, and a paved driveway.
A spacious living room with a wooden ceiling, a large flat-screen TV, a sofa set, a coffee table, and a view of a mountain landscape through large windows.
A coastal view with a wooden railing, ocean waves, and distant mountains.

20. @ Marbella Lane - Seas the Bay Sanctuary

@ Marbella Lane - Seas the Bay Sanctuary
Oak Harbor
United States
Luke
₩332,384
₩839,074 total
includes taxes & fees
Oct 13 - Oct 14
@ Marbella Lane - Seas the Bay Sanctuary
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Explore similar 4-star hotels

Many 4-star hotels have the same amenities as 3-star hotels. See all 4-star hotels in San Juan Island.
Tucker House Inn

Tucker House Inn

275 C Street Friday Harbor WA
₩193,131
₩213,704 total
Nov 2 - Nov 3
includes taxes & fees
9.2/10 Wonderful! (304 reviews)
Tucker House Inn
Otters Pond Bed & Breakfast

Otters Pond Bed & Breakfast

100 Tomihi Dr Eastsound WA
Get rates
10/10 Exceptional! (73 reviews)
Otters Pond Bed & Breakfast
Majestic Inn & Spa

Majestic Inn & Spa

419 Commercial Avenue Anacortes WA
Get ratesMajestic Inn & Spa
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Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Learn more about San Juan Island

San Juan Island entices visitors with its quaint harbor towns, forest trails and the chance to see a range of wildlife, including endangered orcas.

See all hotels in San Juan Island
A waterfront view of Hotel de Haro with a stone wall and a reflection in the water.

Top San Juan Island Hotel Reviews

Roche Harbor Resort

Roche Harbor Resort

10/10 Excellent
"That was nothing that we did NOT like for an older & Historic property actually I was very impressed and I am sure we will be back"
jorge 1-night trip
Posted 9 hours ago
Roche Harbor Resort

Frequently asked questions

How much does it cost to stay in a 3-star hotel in San Juan Island?
To lock in an economical 3-star hotel in San Juan Island, try Expedia's convenient filter tool. Decide on your budget, choose your preferred amenities and much more. Additionally, you can display your search results so the cheapest properties appear on top.
  • Search for the lowest price per night right now from ₩213,704
What is the difference between a 4-star and 3-star hotel in San Juan Island?
Relaxation is easy to find in 3-star hotels in San Juan Island. Besides comfortable surroundings, these more cost-effective lodgings include a host of welcome amenities like WiFi, coffee and tea maker and on-site gym. A 4-star hotel offers a more sophisticated experience with superior features such as an on-site spa, outdoor or indoor swimming pool and bigger rooms. Regardless of your preferred hotel category or budget, we have a perfect fit for you.
What is the difference between a 3-star hotel and a motel in San Juan Island?
Motels generally offer lower rates than hotels, which makes them perfect if you're traveling around San Juan Island and sticking to a budget. A sought-after pick for overnight trips, these roadside getaways come with simply furnished rooms, limited services and ample parking. Choose a 3-star hotel and you can expect to pay extra for additional comfort, privacy and conveniences. Travelers can make use of things like a lobby, free WiFi and business services at this style of property.

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