A beach with clear turquoise water, palm trees, and people enjoying the sand and sea.

Find hotels in Marathon Shores, Marathon

  • Change your mind

    Book hotels with free cancellation

  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
    Sign in

  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
Oct 2 - Oct 4
Next weekend
Oct 9 - Oct 11

Filter by

Star rating

Guest rating

Selecting then applying a filter from this group will update the results on a new page

Our top choices for Marathon Shores hotels

A bar area with a long counter, bar stools, and a view of the water.

1. Fairfield Inn & Suites by Marriott Marathon Florida Keys

Fairfield Inn & Suites by Marriott Marathon Florida Keys
3.0 star property
1.9 km from Marathon Shores
9.2 out of 10, Wonderful, (1,219 reviews)
"Very good experience at this hotel! Will stay again!"
United States
JOSE
The price is ₩193,756
₩217,975 total
includes taxes & fees
Oct 7 - Oct 8
Fairfield Inn & Suites by Marriott Marathon Florida Keys
Three colorful drinks on a table with a thatched roof and outdoor seating.

2. Hampton Inn Marathon - Florida Keys

Hampton Inn Marathon - Florida Keys
2.5 star property
2.1 km from Marathon Shores
9.0 out of 10, Wonderful, (1,006 reviews)
"Great place to stay will definitely stay again"
United States
Linda
The price is ₩165,430
₩186,108 total
includes taxes & fees
Oct 8 - Oct 9
Hampton Inn Marathon - Florida Keys
A wooden dock leading to a row of boats, with a thatched-roof building and palm trees in the background.

3. Bonefish Bay Motel

Bonefish Bay Motel
2.5 star property
1.6 km from Marathon Shores
9.2 out of 10, Wonderful, (652 reviews)
"The room was clean, very large bathroom and closet. We liked the pool and pickleball court. Thank you for the amenities in the room. I would love to stay here again!"
United States
William
The price is ₩141,955
₩159,699 total
includes taxes & fees
Oct 18 - Oct 19
Bonefish Bay Motel
A pool area with lounge chairs and umbrellas, a thatched-roof structure, and a view of the ocean.

4. Glunz Ocean Beach Hotel & Resort

Glunz Ocean Beach Hotel & Resort
3.0 star property
2.5 km from Marathon Shores
9.0 out of 10, Wonderful, (1,002 reviews)
"The Glunz Staff are pleasant and helpful, as they provided suggestions for dining options and adventure site seeing opportunities, as well as providing directional assistance to arrive at such locations."
United States
PAULA LINN
The price is ₩228,824
₩315,650 total
includes taxes & fees
Oct 1 - Oct 2
Glunz Ocean Beach Hotel & Resort
A marina with a dock, a boat, and a row of buildings with large windows.

5. Coconut Cay Resort & Marina

Coconut Cay Resort & Marina
3.0 star property
2.8 km from Marathon Shores
8.6 out of 10, Excellent, (1,062 reviews)
"Amazing place to stay in Marathon, Big rooms, amazing porch view from room 201"
United States
Oscar
The price is ₩107,988
₩137,596 total
includes taxes & fees
Oct 1 - Oct 2
Coconut Cay Resort & Marina
A hammock on a sandy beach with palm trees, a pool, and lounge chairs in the background.

6. Seascape Resort & Marina

Seascape Resort & Marina
3.0 star property
2.5 km from Marathon Shores
9.4 out of 10, Exceptional, (636 reviews)
"My stay was excellent! Room was cleaning, the whole place is kept in wonderful conditions and you have everything you need."
United States
Laura
The price is ₩160,319
₩249,132 total
includes taxes & fees
Oct 13 - Oct 14
Seascape Resort & Marina
A covered outdoor area with a view of a pool and palm trees.

7. Kingsail Resort

Kingsail Resort
2.0 star property
2.9 km from Marathon Shores
8.6 out of 10, Excellent, (1,123 reviews)
"Amazing staff and the pool was great The room was perfect for my trip through the keys"
United States
Jennifer
The price is ₩103,566
₩116,512 total
includes taxes & fees
Oct 7 - Oct 8
Kingsail Resort
A swimming pool surrounded by palm trees and lounge chairs.

8. Tranquility Bay Beachfront Hotel and Resort

Tranquility Bay Beachfront Hotel and Resort
4.0 star property
6.6 km from Marathon Shores
8.8 out of 10, Excellent, (1,000 reviews)
"Very good hotel and a lovely place to spend a few days"
United Kingdom
Stuart
The price is ₩248,051
₩365,618 total
includes taxes & fees
Oct 20 - Oct 21
Tranquility Bay Beachfront Hotel and Resort
A marina with boats docked, a lighthouse, and a resort with outdoor seating.

9. Faro Blanco Resort Marathon Florida Keys, Curio by Hilton

Faro Blanco Resort Marathon Florida Keys, Curio by Hilton
4.0 star property
7.1 km from Marathon Shores
8.6 out of 10, Excellent, (1,159 reviews)
"Great resort, restaurant and bar!"
United States
Rick
The price is ₩221,688
₩300,521 total
includes taxes & fees
Oct 1 - Oct 2
Faro Blanco Resort Marathon Florida Keys, Curio by Hilton
A nighttime pool area with a clear view of the pool, surrounding palm trees, and a building with a sign.

10. Skipjack Resort & Marina

Skipjack Resort & Marina
3.0 star property
4.8 km from Marathon Shores
8.6 out of 10, Excellent, (1,290 reviews)
"Great spot"
Canada
Justin
The price is ₩194,408
₩273,729 total
includes taxes & fees
Oct 1 - Oct 2
Skipjack Resort & Marina
Two hammocks on a sandy beach with a clear blue sky and turquoise water.

11. Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys

Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys
3.0 star property
7 km from Marathon Shores
9.0 out of 10, Wonderful, (1,001 reviews)
"beautiful resort, friendly staff"
United States
amy
The price is ₩183,059
₩253,331 total
includes taxes & fees
Oct 8 - Oct 9
Courtyard by Marriott Faro Blanco Resort, Marathon Florida Keys
A building with a white exterior, purple doors, and a small patio area with chairs and a table.

12. Siesta Motel

Siesta Motel
2.0 star property
2.6 km from Marathon Shores
7.4 out of 10, Good, (784 reviews)
"It was so perfect for the quick trip my friends and I planned, the best prices I could find and perfect for the fisherman. Amazing staff they are very kind, helpful and very cool if your planing a trip you should definitely stay here"
United States
Scott
The price is ₩96,472
₩108,536 total
includes taxes & fees
Oct 13 - Oct 14
Siesta Motel
A beach with palm trees, a sandy path, and beach chairs.

13. Aqua Lodge Rentals At Coconut Cay

Aqua Lodge Rentals At Coconut Cay
3.5 star property
2.7 km from Marathon Shores
9.6 out of 10, Exceptional, (235 reviews)
"Never stayed in a houseboat before. It was a novel experience!"
United States
Susan
The price is ₩167,889
₩398,808 total
includes taxes & fees
Oct 4 - Oct 5
Aqua Lodge Rentals At Coconut Cay
Three Adirondack chairs on a sandy beach with a view of the ocean and a clear sky.

14. Banana Bay Resort & Marina

Banana Bay Resort & Marina
3.0 star property
5 km from Marathon Shores
7.4 out of 10, Good, (1,007 reviews)
"Staff was friendly and room was awesome."
United States
Alex
The price is ₩183,828
₩260,114 total
includes taxes & fees
Oct 28 - Oct 29
Banana Bay Resort & Marina
A wooden deck with two chairs and a table, overlooking a beach with palm trees and the ocean.

15. Rainbow Bend Resort

Rainbow Bend Resort
2.5 star property
8.5 km from Marathon Shores
8.2 out of 10, Very good, (1,003 reviews)
"Great little place, beach front"
United Kingdom
Adam
The price is ₩140,678
₩219,397 total
includes taxes & fees
Oct 1 - Oct 2
Rainbow Bend Resort
A marina with several docked boats and a row of small, white cabins with blue roofs.

16. Yacht Haven Marina

Yacht Haven Marina
3.5 star property
4.3 km from Marathon Shores
9.6 out of 10, Exceptional, (364 reviews)
"Clean Friendly staff Recommend for family"
United States
Yamei
The price is ₩205,942
₩422,090 total
includes taxes & fees
Oct 19 - Oct 20
Yacht Haven Marina
A coastal landscape with clear turquoise waters and a dense tree line under a bright blue sky with scattered clouds.

17. Captain Pips Marina & Hideaway

Captain Pips Marina & Hideaway
3.0 star property
7.5 km from Marathon Shores
9.0 out of 10, Wonderful, (1,010 reviews)
"Awesome place to stay!"
United States
michael
The price is ₩125,447
₩206,290 total
includes taxes & fees
Oct 4 - Oct 5
Captain Pips Marina & Hideaway
An aerial view of a resort with a central pool, multiple buildings, and a beach area with sun loungers.

18. Isla Bella Beach Resort & Spa

Isla Bella Beach Resort & Spa
5.0 star property
8.7 km from Marathon Shores
9.2 out of 10, Wonderful, (1,292 reviews)
"Great location and staff!! Resort was beautiful!!!"
United States
Andrew
The price is ₩297,337
₩416,135 total
includes taxes & fees
Oct 4 - Oct 5
Isla Bella Beach Resort & Spa
A pool area with lounge chairs and umbrellas, surrounded by palm trees.

19. Hawks Cay Resort

Hawks Cay Resort
4.0 star property
13.8 km from Marathon Shores
8.2 out of 10, Very good, (1,006 reviews)
"Beautiful resort"
United States
Katherine
The price is ₩251,152
₩386,641 total
includes taxes & fees
Oct 7 - Oct 8
Hawks Cay Resort
A small boat house named "SEACOVE" with a dock extending into calm water, surrounded by pebbles and rocks.

20. Floating Sea Cove Resort & Marina

Floating Sea Cove Resort & Marina
2.0 star property
2.4 km from Marathon Shores
5.4 out of 10, (1,001 reviews)
"I have stayed here many times great for place to stay"
United States
Matthew
The price is ₩70,407
₩100,457 total
includes taxes & fees
Oct 4 - Oct 5
Floating Sea Cove Resort & Marina
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Where to stay in Marathon Shores

Find the best Marathon Shores areas and neighborhoods for the activities you enjoy most.
An aerial view of a coastal area with a large bay, several islands, and a densely populated shoreline.

Little Venice

When in Little Venice, you can plan a visit to Captain Hooks Marina and Dive Center and Sunset Park Beach, some noteworthy sights in the nearby area.

A sailboat with white sails on a turquoise sea, a beach with palm trees, and a partly cloudy sky.

Coral Lagoon

While Coral Lagoon might not have many sights to explore, venturing just a little farther will lead you to top things to see and do like Captain Hooks Marina and Dive Center and Sunset Park Beach.

An aerial view of a coastal town with a beach, clear turquoise waters, and a small island.

Farara Shores

When in Farara Shores, you can plan a visit to Captain Hooks Marina and Dive Center and Sunset Park Beach, some noteworthy sights in the nearby area.

Top Marathon Shores Hotel Reviews

Banana Bay Resort & Marina

Banana Bay Resort & Marina

10/10 Excellent
"Staff was nice and room clean"
Alexis 3-night trip
Posted 12 hours ago
Banana Bay Resort & Marina

Frequently asked questions

What is Marathon Shores like?
Travelers to Marathon's Marathon Shores neighborhood will be sure to enjoy a stay in this neighborhood. Be sure to check out Captain Hooks Marina and Dive Center and Marathon Air Museum as part of your Marathon Shores travel plans.
How many hotels will I be able to find in Marathon Shores?
If you're searching for places to stay in Marathon, Expedia has something to meet your needs with 196 Marathon Shores hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Marathon Shores, will I receive a refund?
Yes! The majority of hotel reservations are fully refundable if you cancel before the hotel's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you booked a non-refundable reservation, you might still have the option to cancel and receive a refund within a 24-hour period of booking. Put your dates in and click on "Search", then use the filter option "fully refundable" to view the top deals on offer in Marathon Shores.
Where can I learn more about changing or cancelling my trip to Marathon Shores?
For more information about updating your trip to Marathon Shores or cancelling it, go to https://www.expedia.com/service/.
What can I see and do in this Marathon neighborhood?
A few attractions you might want to check out while you're in Marathon Shores are Captain Hooks Marina and Dive Center and Marathon Air Museum. Sunset Park Beach and Coco Plum Beach are also worth a visit when you're out sightseeing in Marathon.