Top 10 Hotels in Port Jefferson Station, NY from ₩117,244 - Competitive Prices

A waterfront at dusk with wooden pilings, a dock, and a small building with lights.

Change your mind
Book hotels with free cancellation
Treat yourself
Sign in to save 10% or more on thousands of hotels
Sign in
Be picky
Search almost a million properties worldwide

Go beyond your typical stay in Port Jefferson Station

Pet friendly

Pool

Apartment

Condo

Waterpark

Family friendly

Check prices for these dates

Tonight

Tomorrow

Next weekend

In two weeks

Our top choices for Port Jefferson Station hotels

1. Americas Best Value Inn Port Jefferson Station Long Island

Port Jefferson Station

Seth

₩218,288

₩249,380 total

includes taxes & fees

Sep 7 - Sep 8

A covered wooden deck with white railings, blue doors, and hanging flower arrangements.

A wooden dock with wicker chairs and a blue umbrella, overlooking a marina with boats and palm trees.

A living room with a patterned sofa set, a glass coffee table, and a decorative chandelier.

A marina with multiple yachts docked at night.

2. Danfords Hotel and Marina

Port Jefferson

William

₩240,916

₩329,531 total

includes taxes & fees

Sep 29 - Sep 30

A modern hotel room with a large bed, a wooden headboard, a built-in bathtub, and a flat-screen TV.

A large indoor swimming pool with a tiled floor, lounge chairs, and a lifeguard stand.

3. Holiday Inn Express Stony Brook by IHG

Centereach

Wade

₩180,301

₩205,997 total

includes taxes & fees

Sep 7 - Sep 8

A hotel with a parking lot, a large building with multiple floors, and a forested area in the background.

A modern bar area with a long counter, bar stools, and a variety of bottles and glasses.

A modern kitchen with granite countertops, a variety of baked goods, and a coffee station.

A spacious lobby with a reception desk, seating area, and decorative lighting.

4. Hilton Garden Inn Stony Brook

Stony Brook

Matthew

₩209,410

₩239,249 total

includes taxes & fees

Sep 13 - Sep 14

A well-organized snack and beverage section with shelves stocked with various products, a refrigerated display, and a small table with snacks.

A modern reception area with a wooden desk, two computer monitors, a sofa, and a decorative shelf with various items.

A banquet hall with round tables set for a formal event, featuring white tablecloths, gold accents, and floral centerpieces.

A modern office space with two desks, each with a computer monitor, keyboard, and a vase of flowers.

5. Holiday Inn Long Island-Islip Arpt East by IHG

Holtsville

MARYELLEN

₩162,408

₩185,544 total

includes taxes & fees

Sep 8 - Sep 9

A large indoor swimming pool with a skylight, lounge chairs, and a seating area with tables.

A hotel dining area with wooden tables and chairs, a central bar, and a television screen.

A hotel reception area with a wooden reception desk, a chandelier, and a welcome sign.

A gazebo with a white exterior and a grey roof, surrounded by lush greenery and a paved patio area with two wicker chairs and a small table.

6. Hampton Inn Long Island-Brookhaven

Farmingville

Randall

₩168,160

₩192,123 total

includes taxes & fees

Sep 2 - Sep 3

A large, multi-story hotel with a prominent tower and a covered entrance.

A hotel room with a bed, a sofa, a small table, a chair, a kitchenette, and a large window with curtains.

A bar area with a long counter, bar stools, a menu board, and a variety of bottles and glasses.

A spacious lobby with a reception desk, seating area, and a large window providing natural light.

7. Courtyard by Marriott Long Island MacArthur Airport

Ronkonkoma

MD Ekrim

₩186,012

₩212,520 total

includes taxes & fees

Sep 7 - Sep 8

An outdoor patio area with seating, a fire pit, and tables and chairs.

A modern kitchen area with a self-serve beverage station, a microwave, and various storage cabinets.

An indoor swimming pool with clear blue water, surrounded by lounge chairs and potted plants.

A hotel reception area with a modern design, including a reception desk, a digital payment terminal, a minibar, and a self-service beverage station.

8. Home2 Suites by Hilton Long Island Brookhaven

Yaphank

Ronald

₩193,101

₩220,619 total

includes taxes & fees

Sep 9 - Sep 10

A swimming pool with a tiled deck, surrounded by windows and chairs.

A multi-story hotel with a prominent American flag, a covered entrance, and a brick facade.

A compact kitchen with wooden cabinets, a stainless steel refrigerator, a microwave, and a coffee maker.

A modern kitchen with grey cabinets, a black countertop, and a wooden floor.

9. Residence Inn by Marriott Long Island Holtsville

Holtsville

Tara

₩186,012

₩212,520 total

includes taxes & fees

Sep 14 - Sep 15

A hotel lobby with a reception desk, a blue sofa, a flat-screen TV, and a fireplace.

A large, carpeted conference room with a high ceiling and recessed lighting.

A hotel room with a large bed, bedside lamps, a desk with a computer, and a chair.

A cubicle with a computer, a chair, and a desk.

10. Comfort Inn Medford - Long Island

Medford

Estela

₩168,340

₩192,329 total

includes taxes & fees

Sep 20 - Sep 21

An indoor swimming pool with clear blue water, surrounded by lounge chairs and tables.

A courtyard with outdoor seating, a barbecue grill, and a pool table.

A modern kitchen with a central island, glass display case, and dark wood cabinets.

A modern office space with a desk, computer, and chair.

11. Homewood Suites by Hilton Ronkonkoma

Ronkonkoma

Jean Paul

₩213,305

₩243,701 total

includes taxes & fees

Sep 27 - Sep 28

A couple in a hot tub with towels and candles, surrounded by mosaic tiles and a plate of food.

An aerial view of a residential area with multiple houses, a large covered structure, and a parking lot.

A spacious hotel lobby with multiple levels, a central chandelier, and a staircase leading to the upper floor.

An outdoor dining area with tables set for a meal, large windows, and a ceiling fan.

12. The Inn And Spa At East Wind

Calverton

Kristine

₩197,092

₩225,197 total

includes taxes & fees

Sep 1 - Sep 2

A modern building entrance with a bench, potted plants, and a blue mat leading to a reception area.

A modern office space with a long desk, two chairs, and a large window providing natural light.

A spacious lobby with a reception desk, seating area, and a staircase leading to upper floors.

A multi-story hotel with a prominent green sign indicating it's a Holiday Inn Express.

13. Holiday Inn Express Hauppauge-Long Island

Hauppauge

emmanuel

₩194,064

₩221,718 total

includes taxes & fees

Sep 27 - Sep 28

A white building with a covered porch, large windows, and hanging flower baskets.

A covered walkway leading to a building with a white brick facade and a blue door.

A hotel lobby with a blue wall, a staircase, a brick planter, a patterned rug, and a bicycle.

14. The Circle Hotel Fairfield

Grasmere

Jo-Arabelle

₩195,893

₩239,054 total

includes taxes & fees

Sep 22 - Sep 23

A hotel with a prominent sign, a covered entrance, and a car parked in front.

A hotel room with two beds, a desk, and a window with curtains.

A spacious restaurant with multiple dining tables and chairs, a kitchen area, and a large window.

A hotel reception area with a wooden reception desk, a framed artwork above the counter, and a potted plant on the counter.

15. La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

Bohemia

MICHELE

₩139,216

₩159,054 total

includes taxes & fees

Aug 31 - Sep 1

A modern kitchen with a breakfast bar, waffle station, and various food items displayed.

A hotel room with a bed, a desk with a flat-screen TV, a chair, a large window with curtains, and a wall-mounted mirror.

A vending area with a 'Welcome to Commack' sign, a 'Local Honey' chalkboard, and a 'Treats' sign above a shelf with snacks.

An indoor swimming pool with clear depth markers, a lifeguard chair, and a seating area with tables and chairs.

16. Hampton Inn Long Island / Commack

Commack

Sarah

₩209,410

₩239,251 total

includes taxes & fees

Sep 17 - Sep 18

An outdoor bar area with seating and a fire feature, surrounded by a building with multiple floors and large windows.

A swimming pool with clear blue water, surrounded by orange chairs and a lifeguard station.

A Courtyard Marriott hotel with a covered outdoor seating area, a clear entrance, and a parking lot.

A hotel room with two beds, a desk, a chair, a large window with curtains, and a colorful wall mural.

17. Courtyard by Marriott Long Island Islip/Courthouse Complex

Central Islip

Maria

₩198,193

₩226,436 total

includes taxes & fees

Sep 6 - Sep 7

A modern kitchen with white brick backsplash, wooden cabinets, and a central island with appliances. There are two dining areas with tables and chairs.

A hotel room with two beds, a desk, a chair, a TV, and a window with curtains.

A modern reception area with a counter, seating, and a refrigerator stocked with beverages.

A swimming pool with a lifeguard chair, lounge chairs, and a window with a view of greenery.

18. Fairfield Inn by Marriott Medford Long Island

Medford

Carl

₩172,180

₩196,715 total

includes taxes & fees

Sep 7 - Sep 8

An outdoor patio area with a stone fire pit surrounded by sofas and chairs, string lights overhead, and a view of a multi-story building in the background.

A spacious lobby with a stone pillar, a flat-screen TV, comfortable seating, and large windows offering a view of the outdoors.

A hotel room with two beds, a large mirror, a TV, and a desk.

19. Residence Inn Long Island Islip/Courthouse Complex

Central Islip

Charlene

₩204,483

₩233,621 total

includes taxes & fees

Sep 1 - Sep 2

A modern reception area with a sofa, ottoman, and desk, large windows, and a patterned wall.

A hotel with a prominent 'Best Western Plus' sign, a parking lot with several cars, and a landscaped entrance area.

A modern dining area with a long table and chairs, a sofa, and a chandelier.

A hotel room with two beds, a wooden headboard, wall-mounted lights, and a bathroom visible through an open door.

20. Best Western Plus Fairfield Hotel

Grasmere

Aimee

₩220,201

₩253,233 total

includes taxes & fees

Aug 31 - Sep 1

View all properties

Save an average of 15% on thousands of hotels when you're signed in

Learn more about Port Jefferson Station

This Long Island community offers easy access to Port Jefferson's charming harbor with its waterfront dining and boutique shopping. Locals recommend visiting Avalon Park and Preserve in nearby Stony Brook for peaceful nature trails and impressive sculpture gardens.

See all hotels in Port Jefferson Station

Top Port Jefferson Station Hotel Reviews

Grove Hotel

10/10 Excellent

"Great place to stay"

Holiday Inn Express Hauppauge-Long Island

10/10 Excellent

"Loved the breakfast bar! A lot of good food to choose from, and kept replenished constantly. The indoor pool was great, just missed a place for a nightcap. Thankfully, we brought our own drinks just in case. The desk staff were very accommodating and friendly both at check-in and leaving at 5 am. Would definitely stay there again!"

Courtyard by Marriott Long Island Islip/Courthouse Complex

8/10 Good

"Very busy property, a lot of college students and a convention. The towels were rough I thought and the toilet ran at night. But other than that the room was clean and bed was comfortable ."

Danfords Hotel and Marina

10/10 Excellent

"Amazing property with great views and excellent restaurant. Very relaxing and right in the heart of Port Jeff."

La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

10/10 Excellent

"Very nice updates in the room since the last time I stayed clean welcoming"

Courtyard by Marriott Long Island MacArthur Airport

10/10 Excellent

"Very efficient, clean and d great location."

Hyatt Regency Long Island

8/10 Good

"Nice location. Lots of weddings! The only downside was the pillows were really thick and hard. So, I woke up with a crick in my neck every morning."

Budget Host East End

10/10 Excellent

"The place and room was clean and safe. The staff was nice but not friendly however the cleaning lady was amazing. WiFi worked and was easy to connect to. The AC worked perfect so I was comfortable the entire stay which was 4 days. I would stay again."

Hampton Inn Long Island/Islandia

10/10 Excellent

"Clean room, friendly staff."

More cheap stays in Port Jefferson Station

Rodeway Inn Macarthur Airport

3055 Veterans Memorial Hwy Ronkonkoma NY

₩127,518

₩145,689 total

Sep 28 - Sep 29

includes taxes & fees

Quality Suites Stratford

1500 South Ave Stratford CT

₩145,823

₩167,697 total

Sep 27 - Sep 28

includes taxes & fees

8.2/10 Very Good! (1,009 reviews)

Comfort Inn Medford - Long Island

2695 Route 112 Medford NY

₩168,340

₩192,329 total

Sep 20 - Sep 21

includes taxes & fees

Budget Host East End

30 Lake Avenue Riverhead NY

₩168,597

₩192,622 total

Sep 10 - Sep 11

includes taxes & fees

6.8/10 (870 reviews)

Holiday Inn Express Stony Brook by IHG

3131 Nesconset Hwy Centereach NY

₩180,301

₩205,997 total

Sep 7 - Sep 8

includes taxes & fees

Holiday Inn Express Hauppauge-Long Island

2050 Express Dr S Hauppauge NY

₩194,064

₩221,718 total

Sep 27 - Sep 28

includes taxes & fees

8.2/10 Very Good! (1,562 reviews)

Frequently asked questions

What's the best place to stay in Port Jefferson Station?

Located 12.5 mi (20.1 km) from the heart of Port Jefferson Station, Holiday Inn Express Hauppauge-Long Island is a top choice for your stay based on our traveler data. Other good options for your stay in the area are Clarion Hotel & Conference Center Ronkonkoma MacArthur Airport and Radisson Hotel Hauppauge-Long Island. See all available top hotels, or vacation rentals in Port Jefferson Station.

If I need to cancel my hotel reservation in Port Jefferson Station, will I receive a refund?

Yes! The majority of hotel room reservations are fully refundable if cancelled before the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If you have a reservation that's non-refundable, you might be able to still cancel and get a refund within 24 hours of your booking. Filter your search by fully refundable to find flexible hotel deals in Port Jefferson Station.

Where can I learn more about changing or cancelling my trip to Port Jefferson Station?

For more information about picking new dates or cancelling your trip to Port Jefferson Station, click here.

What are some accommodations with pools in Port Jefferson Station?

Holiday Inn Express Hauppauge-Long Island: Features a snack bar/deli, an indoor pool, and daily. Radisson Hotel Hauppauge-Long Island and The Circle Hotel Fairfield are two additional hotels that feature an onsite pool. View all hotels with pools in Port Jefferson Station.

What's the best place to stay near John F. Kennedy International Airport (JFK)?

Holiday Inn Express Kennedy Airport is a popular hotel, featuring free breakfast and free WiFi. It's located a short 1.5 mi (2.5 km) from John F. Kennedy Intl. Airport. Other options near the airport are Fairfield Inn by Marriott JFK Airport and Radisson Hotel JFK Airport.

What is staying in Port Jefferson Station like?

Visitors to Port Jefferson Station are sure to enjoy the waterfront. Tourists can also enjoy the city's shopping, restaurants, and university setting. In Port Jefferson Station, there are 5 hotels and other accommodations to choose from. Find out more about Port Jefferson Station.

What should I see while I'm in Port Jefferson Station?

Places to visit in the wider area include Port Jefferson, Cedar Beach, and Avalon Park and Preserve. You'll also find Smithaven Mall and Lake Ronkonkoma in the area. Check out what more to see and do in Expedia's Port Jefferson Station guide.

How can I get around Port Jefferson Station?

To see more of the larger area, hop aboard a train at Port Jefferson Station. If you want to venture out around the area, you may want a rental car in Port Jefferson Station for your journey.

What's the seasonal weather like in Port Jefferson Station?

The hottest months are usually July and August with an average temp of 72°F, while the coldest months are January and February with an average of 37°F. Average annual precipitation for Port Jefferson Station is 55 inches.

Find hotels in Port Jefferson Station, NY from ₩117,244

Change your mind

Treat yourself

Be picky

Go beyond your typical stay in Port Jefferson Station

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for Port Jefferson Station hotels

1. Americas Best Value Inn Port Jefferson Station Long Island

2. Danfords Hotel and Marina

3. Holiday Inn Express Stony Brook by IHG

4. Hilton Garden Inn Stony Brook

5. Holiday Inn Long Island-Islip Arpt East by IHG

6. Hampton Inn Long Island-Brookhaven

7. Courtyard by Marriott Long Island MacArthur Airport

8. Home2 Suites by Hilton Long Island Brookhaven

9. Residence Inn by Marriott Long Island Holtsville

10. Comfort Inn Medford - Long Island

11. Homewood Suites by Hilton Ronkonkoma

12. The Inn And Spa At East Wind

13. Holiday Inn Express Hauppauge-Long Island

14. The Circle Hotel Fairfield

15. La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

16. Hampton Inn Long Island / Commack

17. Courtyard by Marriott Long Island Islip/Courthouse Complex

18. Fairfield Inn by Marriott Medford Long Island

19. Residence Inn Long Island Islip/Courthouse Complex

20. Best Western Plus Fairfield Hotel

Learn more about Port Jefferson Station

Top Port Jefferson Station Hotel Reviews

Grove Hotel

Holiday Inn Express Hauppauge-Long Island

Courtyard by Marriott Long Island Islip/Courthouse Complex

Danfords Hotel and Marina

La Quinta Inn & Suites by Wyndham Islip - MacArthur Airport

Courtyard by Marriott Long Island MacArthur Airport

Hyatt Regency Long Island

Budget Host East End

Hampton Inn Long Island/Islandia

More cheap stays in Port Jefferson Station

Rodeway Inn Macarthur Airport

Quality Suites Stratford

Comfort Inn Medford - Long Island

Budget Host East End

Holiday Inn Express Stony Brook by IHG

Holiday Inn Express Hauppauge-Long Island

Frequently asked questions

Explore a world of travel with Expedia

Go further with the Expedia app