An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

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Our top choices for Mission Bay hotels

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,465 reviews)
"Loved our stay here!"
United States
elizabeth
The price is ₩233,701
₩308,336 total
includes taxes & fees
Sep 3 - Sep 4
The Dana on Mission Bay

2. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,574 reviews)
"Gorgeous resort!"
United States
Maria
The price is ₩289,181
₩405,573 total
includes taxes & fees
Sep 7 - Sep 8
San Diego Mission Bay Resort

3. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,860 reviews)
"Clean rooms and friendly staff"
United States
Cristina
The price is ₩297,325
₩414,873 total
includes taxes & fees
Sep 8 - Sep 9
Paradise Point Resort & Spa

4. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very Good, (1,681 reviews)
"We absolutely loved this hotel and will definitely revisit!"
United States
Casey
The price is ₩247,310
₩357,370 total
includes taxes & fees
Sep 10 - Sep 11
Hyatt Regency Mission Bay Spa and Marina

5. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,214 reviews)
"It was a good stay for the price!"
United States
marissa
The price is ₩169,318
₩194,622 total
includes taxes & fees
Sep 8 - Sep 9
Wyndham Garden San Diego Near SeaWorld

6. Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
2.9 km from Mission Bay
8.6 out of 10, Excellent, (4,052 reviews)
"Clean room, hot breakfast, free parking, friendly staff"
United States
Emmanuel
The price is ₩155,660
₩178,922 total
includes taxes & fees
Sep 1 - Sep 2
Comfort Inn Sea World Area

7. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,266 reviews)
"Great place to stay. Great price always happy with our stay."
United States
Joshua
The price is ₩180,399
₩207,359 total
includes taxes & fees
Sep 1 - Sep 2
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

8. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,717 reviews)
"Very happy with the overall stay. Very efficient procedure from check in to check out."
United States
Ivan
The price is ₩225,782
₩259,525 total
includes taxes & fees
Sep 1 - Sep 2
Hampton Inn & Suites San Diego Airport Liberty Station

9. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (1,960 reviews)
"Great place to stay!!!"
United States
Layne
The price is ₩213,723
₩245,238 total
includes taxes & fees
Sep 8 - Sep 9
Old Town Inn

10. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (2,340 reviews)
"I liked that the stay was near where I was visiting ."
United States
Alexis
The price is ₩155,557
₩178,804 total
includes taxes & fees
Sep 3 - Sep 4
GreenTree Inn San Diego Mission Bay

11. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
8.8 out of 10, Excellent, (1,000 reviews)
"Verygood breakfast and nice people"
United States
Xiaotong
The price is ₩186,791
₩214,707 total
includes taxes & fees
Aug 30 - Aug 31
Holiday Inn Express San Diego - SeaWorld Area by IHG

12. Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.2 km from Mission Bay
7.0 out of 10, Good, (1,901 reviews)
"Good hôtel for a short stay. Near the airport."
Canada
Emilie
The price is ₩87,833
₩100,960 total
includes taxes & fees
Sep 13 - Sep 14
Heritage Inn San Diego

13. Kings Inn San Diego

Kings Inn San Diego
2.5 star property
4.9 km from Mission Bay
8.8 out of 10, Excellent, (3,715 reviews)
"Great place to stay"
United States
Manuel
The price is ₩141,567
₩162,448 total
includes taxes & fees
Aug 27 - Aug 28
Kings Inn San Diego

14. Best Western Plus Marina Gateway Hotel

Best Western Plus Marina Gateway Hotel
3.5 star property
16.7 km from Mission Bay
9.2 out of 10, Wonderful, (4,037 reviews)
"Great stay!"
United States
Samuel
The price is ₩198,013
₩218,201 total
includes taxes & fees
Sep 7 - Sep 8
Best Western Plus Marina Gateway Hotel

15. Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.6 out of 10, Excellent, (3,669 reviews)
"Staff was very helpful ; very clean and , especially for being so close together airport, very quiet"
United States
Celia
The price is ₩198,760
₩298,450 total
includes taxes & fees
Sep 2 - Sep 3
Sheraton San Diego Resort

16. Town and Country San Diego

Town and Country San Diego
4.0 star property
5.2 km from Mission Bay
8.6 out of 10, Excellent, (1,807 reviews)
"Fun place to stay!"
United States
Megan
The price is ₩252,861
₩338,400 total
includes taxes & fees
Aug 31 - Sep 1
Town and Country San Diego

17. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

Best Western Inn & Suites San Diego – Zoo/SeaWorld Area
2.5 star property
3.6 km from Mission Bay
8.0 out of 10, Very Good, (2,952 reviews)
"Great place to stay"
United States
Philomena
The price is ₩208,622
₩239,799 total
includes taxes & fees
Sep 24 - Sep 25
Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

18. Handlery Hotel

Handlery Hotel
3.5 star property
5 km from Mission Bay
8.4 out of 10, Very Good, (2,896 reviews)
"Good location, nice property, and very friendly staff!"
United States
Justin
The price is ₩164,689
₩189,301 total
includes taxes & fees
Aug 27 - Aug 28
Handlery Hotel

19. Comfort Inn San Diego Old Town

Comfort Inn San Diego Old Town
2.5 star property
Old Town San Diego, 4 km from Mission Bay
8.2 out of 10, Very Good, (2,049 reviews)
"Friendly staff and great breakfast!"
Canada
Heather
The price is ₩150,983
₩173,548 total
includes taxes & fees
Sep 1 - Sep 2
Comfort Inn San Diego Old Town

20. Best Western Seven Seas

Best Western Seven Seas
3.0 star property
5.6 km from Mission Bay
7.8 out of 10, Good, (3,811 reviews)
"Really made the vacation great, the architectural property built in the 60's has a very pleasant feel with various trees, beautiful property!"
United States
Matthew
The price is ₩116,885
₩134,353 total
includes taxes & fees
Aug 27 - Aug 28
Best Western Seven Seas
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Ocean Beach and Dog Beach, you won't get bored spending a day wandering around this part of San Diego.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and Hyatt Regency Mission Bay Spa and Marina.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page.
What is there to do around this San Diego neighborhood?
Dip your toes in the water at Mission and Pacific Beaches or Ski Beach while you're in Mission Bay. You could also plan a visit to Mission Bay or Mission Bay Golf Course while you're in the neighborhood. Don't miss favorite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot, and Hotel Circle. When you're sightseeing in San Diego, Crown Point Shores and North Cove Beach are also worth a stop.