An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

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Our top choices for Mission Bay hotels

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,447 reviews)
"Awesome location by the Bay Firefly restaurant was excellent staff and food"
Canada
Satish
The price is ₩229,249
₩302,462 total
includes taxes & fees
Sep 27 - Sep 28
The Dana on Mission Bay

2. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,617 reviews)
"Everything was excellent!"
United States
Evangeline
The price is ₩337,470
₩459,582 total
includes taxes & fees
Oct 19 - Oct 20
San Diego Mission Bay Resort

3. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,891 reviews)
"Great Stay!"
United States
Adarsh
The price is ₩289,785
₩404,815 total
includes taxes & fees
Oct 4 - Oct 5
Paradise Point Resort & Spa

4. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,649 reviews)
"Helpful staff, concierge, pools"
United States
Linda
The price is ₩269,705
₩381,721 total
includes taxes & fees
Sep 30 - Oct 1
Hyatt Regency Mission Bay Spa and Marina

5. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,202 reviews)
"Great place to stay!"
United States
Nayla
The price is ₩130,000
₩149,429 total
includes taxes & fees
Sep 30 - Oct 1
Wyndham Garden San Diego Near SeaWorld

6. Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.2 km from Mission Bay
7.0 out of 10, Good, (2,002 reviews)
"Good room with nice shower. Staff was good and helpful and assisted me with booking."
United States
Mark
The price is ₩79,962
₩91,912 total
includes taxes & fees
Oct 11 - Oct 12
Heritage Inn San Diego

7. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,340 reviews)
"Very nice & very clean place to stay"
United States
Xuan
The price is ₩187,817
₩215,887 total
includes taxes & fees
Oct 7 - Oct 8
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

8. Best Western Plus Marina Gateway Hotel

Best Western Plus Marina Gateway Hotel
3.5 star property
16.7 km from Mission Bay
9.2 out of 10, Wonderful, (4,148 reviews)
"Excellent hotel the staffing was great"
United States
Leonard
The price is ₩218,352
₩240,613 total
includes taxes & fees
Sep 30 - Oct 1
Best Western Plus Marina Gateway Hotel

9. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,701 reviews)
"Clean rooms and friendly staff!"
United States
Ana Lopez
The price is ₩265,679
₩305,385 total
includes taxes & fees
Oct 7 - Oct 8
Hampton Inn & Suites San Diego Airport Liberty Station

10. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (1,998 reviews)
"Great place to stay!!!"
United States
Layne
The price is ₩194,851
₩223,597 total
includes taxes & fees
Sep 29 - Sep 30
Old Town Inn

11. Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
2.9 km from Mission Bay
8.6 out of 10, Excellent, (4,145 reviews)
"The room was clean when we got there and staff were very helpful and friendly!"
United States
Karla Daniela
The price is ₩146,372
₩168,247 total
includes taxes & fees
Sep 30 - Oct 1
Comfort Inn Sea World Area

12. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,386 reviews)
"For price location it's great"
United States
Joseph
The price is ₩141,615
₩162,780 total
includes taxes & fees
Sep 29 - Sep 30
GreenTree Inn San Diego Mission Bay

13. Kings Inn San Diego

Kings Inn San Diego
2.5 star property
4.9 km from Mission Bay
8.8 out of 10, Excellent, (3,757 reviews)
"Love this hotel, will be back endlessly love it here!"
United States
Armando
The price is ₩112,218
₩128,770 total
includes taxes & fees
Sep 29 - Sep 30
Kings Inn San Diego

14. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

La Quinta Inn & Suites by Wyndham San Diego Mission Bay
3.0 star property
North Pacific Beach, 3.5 km from Mission Bay
8.0 out of 10, Very good, (1,626 reviews)
"Lovely room and staff were very friendly and helpful."
United States
Virgen
The price is ₩158,245
₩181,932 total
includes taxes & fees
Oct 4 - Oct 5
La Quinta Inn & Suites by Wyndham San Diego Mission Bay

15. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Hilton Garden Inn San Diego Old Town/SeaWorld Area
3.0 star property
Old Town San Diego, 3.1 km from Mission Bay
8.8 out of 10, Excellent, (1,513 reviews)
"great location, excellent hotel"
United States
Edward Palacios
The price is ₩188,604
₩216,781 total
includes taxes & fees
Sep 28 - Sep 29
Hilton Garden Inn San Diego Old Town/SeaWorld Area

16. Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2.3 km from Mission Bay
8.8 out of 10, Excellent, (2,416 reviews)
"Very relaxing and peaceful at this hotel."
United States
melissa
The price is ₩219,111
₩327,061 total
includes taxes & fees
Sep 30 - Oct 1
Bahia Resort Hotel

17. Town and Country San Diego

Town and Country San Diego
4.0 star property
5.2 km from Mission Bay
8.6 out of 10, Excellent, (1,915 reviews)
"Enjoyed our stay"
United States
Sol
The price is ₩305,318
₩397,718 total
includes taxes & fees
Sep 26 - Sep 27
Town and Country San Diego

18. Best Western Plus Hacienda Hotel Old Town

Best Western Plus Hacienda Hotel Old Town
3.0 star property
Old Town San Diego, 3.7 km from Mission Bay
8.4 out of 10, Very good, (2,150 reviews)
"Great stay all around"
United States
Jason
The price is ₩181,759
₩208,923 total
includes taxes & fees
Sep 28 - Sep 29
Best Western Plus Hacienda Hotel Old Town

19. Days Inn by Wyndham San Diego Hotel Circle

Days Inn by Wyndham San Diego Hotel Circle
3.0 star property
5.5 km from Mission Bay
8.0 out of 10, Very good, (3,089 reviews)
"Great area to stay that is close to a lot of places."
United States
Joshua
The price is ₩114,048
₩131,092 total
includes taxes & fees
Oct 21 - Oct 22
Days Inn by Wyndham San Diego Hotel Circle

20. Handlery Hotel

Handlery Hotel
3.5 star property
5 km from Mission Bay
8.4 out of 10, Very good, (2,945 reviews)
"This was convenient close to everything, the rooms were decent and the staff friendly"
United States
Matthew
The price is ₩141,771
₩162,959 total
includes taxes & fees
Sep 28 - Sep 29
Handlery Hotel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Ocean Beach and Dog Beach, you won't get bored spending a day wandering around this part of San Diego.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 37 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page.
What is there to do around this San Diego neighborhood?
Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Mission Beach and Marine Corps Recruit Depot are some favorite places to visit in the area around Mission Bay. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.