An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

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Oct 2 - Oct 4
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Oct 9 - Oct 11

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Our top choices for Mission Bay hotels

A pool area with a hot tub, lounge chairs, and umbrellas.

1. The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,435 reviews)
"Awesome location by the Bay Firefly restaurant was excellent staff and food"
Canada
Satish
The price is ₩229,041
₩302,186 total
includes taxes & fees
Sep 27 - Sep 28
The Dana on Mission Bay
A poolside view with a lounge chair, a towel, a tray with a drink and a coconut, and a pool with palm trees in the background.

2. San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,621 reviews)
"Wonderful place"
United States
Angela
The price is ₩337,163
₩459,164 total
includes taxes & fees
Oct 19 - Oct 20
San Diego Mission Bay Resort
An aerial view of a resort with a central swimming pool, palm trees, and a view of the ocean and beach.

3. Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,894 reviews)
"Great Stay!"
United States
Adarsh
The price is ₩269,730
₩381,698 total
includes taxes & fees
Oct 25 - Oct 26
Paradise Point Resort & Spa
A resort pool with a lazy river, palm trees, and a view of the ocean.

4. Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,651 reviews)
"Perfect breakfast!"
United States
Farzam
The price is ₩269,460
₩381,374 total
includes taxes & fees
Sep 30 - Oct 1
Hyatt Regency Mission Bay Spa and Marina
A modern hotel lobby with a central seating area, a bar, and a large window providing natural light.

5. Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,188 reviews)
"Great place to stay!"
United States
Nayla
The price is ₩129,882
₩149,293 total
includes taxes & fees
Oct 7 - Oct 8
Wyndham Garden San Diego Near SeaWorld
A reception desk with a wooden panel wall, a crescent-shaped logo, and a digital payment terminal.

6. Comfort Inn San Diego - SeaWorld Area

Comfort Inn San Diego - SeaWorld Area
3.5 star property
2.8 km from Mission Bay
8.6 out of 10, Excellent, (4,155 reviews)
"The room was clean when we got there and staff were very helpful and friendly!"
United States
Karla Daniela
The price is ₩147,932
₩170,044 total
includes taxes & fees
Sep 29 - Sep 30
Comfort Inn San Diego - SeaWorld Area
A building with a "Bienvenidos" sign, palm trees, and a well-maintained garden.

7. Old Town Inn

Old Town Inn
2.5 star property
3.5 km from Mission Bay
9.0 out of 10, Wonderful, (2,003 reviews)
"Great place to stay!!!"
United States
Layne
The price is ₩186,117
₩213,578 total
includes taxes & fees
Sep 28 - Sep 29
Old Town Inn
A modern lobby with a stone wall, blue sofas, a reception desk, and a staircase.

8. Kings Inn San Diego

Kings Inn San Diego
2.5 star property
4.9 km from Mission Bay
8.8 out of 10, Excellent, (3,773 reviews)
"Love this hotel, will be back endlessly love it here!"
United States
Armando
The price is ₩93,438
₩107,220 total
includes taxes & fees
Oct 27 - Oct 28
Kings Inn San Diego
A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

9. Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
5.3 km from Mission Bay
9.2 out of 10, Wonderful, (1,708 reviews)
"Clean rooms and friendly staff!"
United States
Ana Lopez
The price is ₩245,926
₩282,681 total
includes taxes & fees
Oct 25 - Oct 26
Hampton Inn & Suites San Diego Airport Liberty Station
A modern building with multiple windows, outdoor seating, and a chessboard.

10. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
4.0 star property
2.8 km from Mission Bay
9.2 out of 10, Wonderful, (1,352 reviews)
"Very nice & very clean place to stay"
United States
Xuan
The price is ₩187,647
₩215,691 total
includes taxes & fees
Oct 4 - Oct 5
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
A living room with a large window, a flat-screen TV, and a patterned rug.

11. GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,386 reviews)
"For price location it's great"
United States
Joseph
The price is ₩152,455
₩175,240 total
includes taxes & fees
Oct 1 - Oct 2
GreenTree Inn San Diego Mission Bay
A pool area with a hot tub, lounge chairs, and umbrellas.

12. Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.2 km from Mission Bay
7.0 out of 10, Good, (2,014 reviews)
"Good room with nice shower. Staff was good and helpful and assisted me with booking."
United States
Mark
The price is ₩81,244
₩93,386 total
includes taxes & fees
Sep 30 - Oct 1
Heritage Inn San Diego
A spacious kitchen with a central island, wooden ceiling, and modern lighting fixtures.

13. Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.3 km from Mission Bay
8.8 out of 10, Excellent, (1,007 reviews)
"We loved our stay ! The staff was helpful and always maintained excellent cleaning"
United States
Christina
The price is ₩182,799
₩210,119 total
includes taxes & fees
Sep 30 - Oct 1
Holiday Inn Express San Diego - SeaWorld Area by IHG
A modern dining area with wooden tables and chairs, a central bar area, and a view of the city through large windows.

14. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

La Quinta Inn & Suites by Wyndham San Diego Mission Bay
3.0 star property
North Pacific Beach, 3.5 km from Mission Bay
8.0 out of 10, Very good, (1,629 reviews)
"We only stayed one night but it was nice and easy"
United States
Lauren
The price is ₩158,101
₩181,768 total
includes taxes & fees
Oct 1 - Oct 2
La Quinta Inn & Suites by Wyndham San Diego Mission Bay
An outdoor dining area with tables and chairs, overlooking a beach and ocean.

15. Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2.3 km from Mission Bay
8.8 out of 10, Excellent, (2,421 reviews)
"Very relaxing and peaceful at this hotel."
United States
melissa
The price is ₩215,568
₩322,934 total
includes taxes & fees
Oct 25 - Oct 26
Bahia Resort Hotel
A resort with a large swimming pool surrounded by lounge chairs and palm trees.

16. Handlery Hotel

Handlery Hotel
3.5 star property
5 km from Mission Bay
8.4 out of 10, Very good, (2,954 reviews)
"This was convenient close to everything, the rooms were decent and the staff friendly"
United States
Matthew
The price is ₩139,740
₩160,624 total
includes taxes & fees
Sep 29 - Sep 30
Handlery Hotel
A rectangular swimming pool with lounge chairs and umbrellas, surrounded by tall trees and greenery.

17. Days Inn by Wyndham San Diego Hotel Circle

Days Inn by Wyndham San Diego Hotel Circle
3.0 star property
5.5 km from Mission Bay
8.0 out of 10, Very good, (3,096 reviews)
"Great area to stay that is close to a lot of places."
United States
Joshua
The price is ₩113,945
₩130,974 total
includes taxes & fees
Oct 21 - Oct 22
Days Inn by Wyndham San Diego Hotel Circle
A balcony with wicker furniture overlooking a marina and a coastal cityscape.

18. Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.6 out of 10, Excellent, (3,710 reviews)
"Great place to stay"
United States
andrew
The price is ₩188,216
₩284,834 total
includes taxes & fees
Oct 25 - Oct 26
Sheraton San Diego Resort
A modern dining area with multiple tables and chairs, large windows, and artwork on the walls.

19. Comfort Inn San Diego Old Town

Comfort Inn San Diego Old Town
2.5 star property
Old Town San Diego, 4 km from Mission Bay
8.2 out of 10, Very good, (2,066 reviews)
"The room was very clean, the staff was very friendly, and around the property was nice as well."
United States
Christian
The price is ₩148,474
₩170,664 total
includes taxes & fees
Oct 25 - Oct 26
Comfort Inn San Diego Old Town
An outdoor lounge area with seating, a fire feature, and a pool in the background.

20. Town and Country San Diego

Town and Country San Diego
4.0 star property
5.2 km from Mission Bay
8.6 out of 10, Excellent, (1,921 reviews)
"Enjoyed our stay"
United States
Sol
The price is ₩309,608
₩402,609 total
includes taxes & fees
Sep 27 - Sep 28
Town and Country San Diego
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
View all properties

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most.
A large stadium with the sign "Cobo Park" and palm trees around it.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

A pier at sunset with people sitting and standing, waves crashing below.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

A coastal cityscape with a long sandy beach, a pier, and dense urban buildings.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

A theater marquee with ornate designs and the name "Gaslamp Quarter".

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

A beach with palm trees, a hotel, and people enjoying the sand and water.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Ocean Beach and Dog Beach, you won't get bored spending a day wandering around this part of San Diego.

Top Mission Bay Hotel Reviews

Bay Club Hotel & Marina

Bay Club Hotel & Marina

10/10 Excellent
"We absolutely loved our view of the bay. Rooms were clean and they have a very friendly staff. Hot tub and pool looks very inviting. Just across the street is a great place to hang in a small beach and go for your morning walks."
Shannon Kay 4-night trip
Posted 4 hours ago
Bay Club Hotel & Marina

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 37 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To find more details about updating your trip to Mission Bay or cancelling it, head over to our customer service page.
What is there to do around this San Diego neighborhood?
Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Mission Beach and Marine Corps Recruit Depot are some favorite places to visit in the area around Mission Bay. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.