The Best Hotels Closest to beach near Mission Bay in San Diego for 2026

Change your mind
Book hotels with free cancellation
Treat yourself
Sign in to save 10% or more on thousands of hotels
Sign in
Be picky
Search almost a million properties worldwide

Check prices for these dates

Tonight

Tomorrow

This weekend

Next weekend

Our top choices for beach near Mission Bay hotels

A modern building with multiple windows, outdoor seating, and a chessboard.

A spacious indoor area with a pool table, seating, and a staircase.

A modern hotel reception area with a marble counter, a 'Welcome to Hampton' sign, and a reception desk.

A hotel with a pool, lounge chairs, and a sunset sky.

1. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

2.3 km from beach near Mission Bay

Xuan

₩224,169

₩257,671 total

includes taxes & fees

Sep 28 - Sep 29

A building with a "Bienvenidos" sign, palm trees, and a well-maintained garden.

A hotel bathroom with a mirror, a vase of flowers, a coffee maker, and a towel dispenser.

A garden with a sign indicating a lobby.

A hotel room with a large bed, a bathroom with a shower, a bedside table with a lamp, and a painting on the wall.

2. Old Town Inn

2.9 km from beach near Mission Bay

Layne

₩197,504

₩226,641 total

includes taxes & fees

Oct 4 - Oct 5

An outdoor seating area with a pergola, tables, and chairs, and a sign welcoming to the Cosmopolitan Restaurant.

A sign with 'Hostess,' 'Saloon,' 'Check In,' and 'Bar' indicating a hotel or resort area.

A restaurant with striped wallpaper, wooden tables, and chairs.

A rustic wooden building with a covered patio area, surrounded by potted plants and a barrel.

3. Cosmopolitan Hotel & Restaurant

Old Town San Diego, 2.8 km from beach near Mission Bay

james

₩270,766

₩305,288 total

includes taxes & fees

Sep 28 - Sep 29

A pool area with a hot tub, lounge chairs, and umbrellas.

A hotel room with a bed, a lamp, and a box of pizza.

A dining table set for a wedding with floral centerpieces and candles, overlooking a marina with boats.

A marina with boats, a bridge, and a building with a pool and palm trees.

4. The Dana on Mission Bay

Mission Bay, 2.2 km from beach near Mission Bay

Satish

₩232,370

₩306,580 total

includes taxes & fees

Sep 27 - Sep 28

A modern restaurant with high tables, booths, and a central island.

A modern living room with a stone fireplace, two sofas, ottomans, and a patterned rug.

A gym with treadmills, exercise bikes, and a pool area visible through glass doors.

A spacious living area with a fireplace, seating arrangements, and a large TV screen.

5. Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Pacific Beach, 3.1 km from beach near Mission Bay

Sergio

₩184,220

₩211,751 total

includes taxes & fees

Sep 28 - Sep 29

A hotel with a central courtyard, palm trees, and a fountain.

A spacious lobby with leather seating, a reception desk, a bar area, and a staircase.

A spacious interior with a high ceiling and multiple hanging spherical light fixtures.

A fountain surrounded by tables and chairs, with string lights and palm trees.

6. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Old Town San Diego, 2.4 km from beach near Mission Bay

Edward Palacios

₩187,369

₩215,372 total

includes taxes & fees

Sep 27 - Sep 28

A spacious kitchen with a central island, wooden ceiling, and modern lighting fixtures.

A hotel reception desk with two monitors, a coffee machine, and a potted plant.

A snack and beverage vending area with a refrigerator and shelves stocked with snacks and drinks.

A modern reception desk with a woman standing behind it, a large digital display, and a sign for 'Haightay Inn Express'.

7. Holiday Inn Express San Diego - SeaWorld Area by IHG

2 km from beach near Mission Bay

Christina

₩207,436

₩238,437 total

includes taxes & fees

Oct 20 - Oct 21

An aerial view of a resort with a central swimming pool, palm trees, and a view of the ocean and beach.

An outdoor dining area with tables and chairs, umbrellas, and string lights against a sunset backdrop.

A modern building with a curved roof, surrounded by lush tropical vegetation.

A living room with a fireplace, a television, a sofa, a chair, a round coffee table, and a view of the ocean through glass doors.

8. Paradise Point Resort & Spa

Mission Bay, 2.2 km from beach near Mission Bay

Adarsh

₩285,671

₩401,066 total

includes taxes & fees

Oct 4 - Oct 5

A modern dining area with tables and chairs, a kitchen area with cabinets and appliances, and a large window.

A gym with treadmills, an elliptical, and dumbbells, with a TV on the wall and large windows.

A hotel room with two beds, a desk, a chair, a TV, and a window with curtains.

9. Comfort Inn Sea World Area

2.3 km from beach near Mission Bay

Rick

₩148,365

₩170,538 total

includes taxes & fees

Sep 29 - Sep 30

A pool area with lounge chairs and palm trees.

A patio with a fountain, outdoor seating, and potted plants.

A buffet with various food options, wooden cabinets, and a ceiling fan.

A round window with a view of a cityscape, palm trees, and a clear sky.

10. Best Western Plus Hacienda Hotel Old Town

Old Town San Diego, 3 km from beach near Mission Bay

Jason

₩184,234

₩211,768 total

includes taxes & fees

Sep 27 - Sep 28

A poolside view with a lounge chair, a towel, a tray with a drink and a coconut, and a pool with palm trees in the background.

A spacious lobby with a high ceiling, large windows, and a view of palm trees.

A coastal hotel with multiple buildings, a marina with boats, and a beach area.

An outdoor seating area with a canopy, lounge chairs, and a fire pit.

11. San Diego Mission Bay Resort

Mission Bay, 0.7 km from beach near Mission Bay

Evangeline

₩342,064

₩465,839 total

includes taxes & fees

Oct 18 - Oct 19

An outdoor dining area with tables and chairs, overlooking a beach and ocean.

A serene garden with a pond, lush greenery, and a gazebo.

A waterfront property with a pathway lined by palm trees and string lights, leading to a building with a dock and boats.

A beachside hotel with a row of beach chairs and umbrellas, palm trees, and a calm sea.

12. Bahia Resort Hotel

Central Mission Beach, 2.9 km from beach near Mission Bay

María

₩240,681

₩352,850 total

includes taxes & fees

Oct 21 - Oct 22

A modern reception area with a large arched window, a reception desk, a blue sofa, and a round wooden table.

A modern hotel room with a bed, a desk, a chair, a TV, and a sofa.

A hot tub with metal railings, surrounded by palm trees and a fence, with a building in the background.

A modern bathroom with a white sink, a mirror, a black refrigerator, and a microwave on a shelf.

13. Best Western San Diego Pacific Beach/Mission Bay

2.1 km from beach near Mission Bay

Guadalupe Pina

₩143,859

₩165,358 total

includes taxes & fees

Sep 28 - Sep 29

A resort pool with a lazy river, palm trees, and a view of the ocean.

An aerial view of a marina with numerous boats docked, a bridge connecting to the mainland, and surrounding greenery.

A marina with boats docked, a covered outdoor dining area with red chairs and tables, and a view of the marina in the background.

A hotel entrance with a covered walkway, palm trees, and a modern building in the background.

14. Hyatt Regency Mission Bay Spa and Marina

Mission Bay, 2.5 km from beach near Mission Bay

Linda

₩273,376

₩386,916 total

includes taxes & fees

Sep 30 - Oct 1

A multi-story hotel with a lobby, outdoor seating, and a well-lit entrance.

A courtyard with artificial grass, stone pathways, and various plants.

A reception desk with two computer monitors, a potted plant, and a large wall mural.

A brown leather sofa with two white pillows, a small round table with a candle, and three framed artworks on the wall.

15. The Alcala Hotel Mission Valley/Seaworld

2.8 km from beach near Mission Bay

Kori

₩128,789

₩148,035 total

includes taxes & fees

Sep 27 - Sep 28

A modern hotel lobby with a central seating area, a bar, and a large window providing natural light.

A hotel with a sign reading "Wyndham Garden," surrounded by palm trees and a well-lit entrance.

A modern hotel lobby with a reception desk, bar area, and seating with bar stools and cushioned chairs.

A spacious room with large windows, modern furniture, and decorative lighting fixtures.

16. Wyndham Garden San Diego Near SeaWorld

2.2 km from beach near Mission Bay

Nayla

₩131,770

₩151,463 total

includes taxes & fees

Sep 29 - Sep 30

A hotel reception desk with a coffee machine, a glass display case with pastries, and a lamp.

A two-story building with a blue and white exterior, a central staircase, and a sign labeled "LOBBY".

A hotel room with two beds, a desk, a chair, a TV, and a painting on the wall.

17. Heritage Inn San Diego

2 km from beach near Mission Bay

Mark

₩81,051

₩93,164 total

includes taxes & fees

Oct 7 - Oct 8

A person seated at a table reading a newspaper, with a basket of items, a cup, and a flower on the table.

A reception area with a wooden counter, a statue, and various framed certificates on the wall.

A swimming pool with lounge chairs and umbrellas, surrounded by a fenced patio area.

A hotel entrance with a black door, orange arches, and a 'Park to Register' sign.

18. Americas Best Value Inn Loma Lodge

3.1 km from beach near Mission Bay

ESTELA

₩98,899

₩111,509 total

includes taxes & fees

Sep 28 - Sep 29

A swimming pool with lounge chairs and umbrellas, surrounded by palm trees and a hilly landscape.

A modern motel with a prominent '6' sign, a covered entrance, and a parking area with cars and palm trees.

A hotel room with two beds, a window, a heater, and a nightstand with a lamp.

A reception area with a digital display, tiled flooring, and potted plants.

19. Motel 6 San Diego, CA - Hotel Circle - Mission Valley

3.1 km from beach near Mission Bay

Jack

₩107,551

₩123,693 total

includes taxes & fees

Oct 1 - Oct 2

A reception area with a dark blue wall, a reception desk, a chair, a potted plant, and a framed artwork on the wall.

A vending machine area with snacks, beverages, and a refrigerator.

A hotel room with a large bed, a bedside table with a lamp, a framed picture on the wall, and a window with curtains.

A swimming pool with lounge chairs and a sign for the Howard Johnson Inn.

20. Howard Johnson by Wyndham San Diego Sea World

3 km from beach near Mission Bay

Juan

₩128,432

₩149,177 total

includes taxes & fees

Oct 6 - Oct 7

View all properties

Compare popular hotels close to beach near Mission Bay

Property	Property class	Guest rating
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town	9.2 Wonderful 1,336 reviews	View
Old Town Inn	9.0 Wonderful 1,996 reviews	View
Cosmopolitan Hotel & Restaurant	9.2 Wonderful 759 reviews	View
The Dana on Mission Bay	9.0 Wonderful 4,444 reviews	View
Fairfield Inn & Suites by Marriott San Diego Pacific Beach	8.8 Excellent 964 reviews	View

Top beach near Mission Bay Hotel Reviews

Hilton Garden Inn San Diego Old Town/SeaWorld Area

10/10 Excellent

"Clean room"

Handlery Hotel

10/10 Excellent

"Great for family!"

Comfort Inn Sea World Area

10/10 Excellent

"Clean room, very quiet"

Bahia Resort Hotel

8/10 Good

"Our bayfront room was beautiful and comfortable. The front desk was very kind and sent a complimentary bottle of wine to our room as we celebrated our 25th anniversary, having been married on the William D Evans in 2001. Apart from the low pressure and lag in hot water coming out of the shower, and the curtains not quite closing fully, we very much enjoyed our stay. The price was a tad high for a Sunday night at $460 incl fees, but the king size bed and thermostat made it an extremely comfortable over night stay. The proximity of the Bahia to both the bay and the ocean, is fabulous! We rented bikes and enjoyed a ride down the boardwalk. Thank you to the Bahia and staff for a lovely anniversary stay!"

The Alcala Hotel Mission Valley/Seaworld

10/10 Excellent

"Everything is very good, only the WiFi service did not work at all and tv."

Hampton Inn San Diego/Mission Valley

8/10 Good

"A bit more variety of food for breakfast"

Crowne Plaza San Diego - Mission Valley by IHG

10/10 Excellent

"Thanks for everything but I don’t like the customer service from Outside us they are not helping they trying to charge me for my son last name correction but thank wit Expedia team I emailed them my problem and they fixed for free but the guy was asking me to pay $78. Thanks Expedia for everything and I will look forward booking with you guys and I will recommend your services to everyone. We need allowable agent."

Heritage Inn San Diego

8/10 Good

"Overall experience was good. Staff was helpful but office hours are limited. Parking spaces are small and gets filled quickly."

GreenTree Inn San Diego Mission Bay

10/10 Excellent

"Recommend it"

Other attractions near beach near Mission Bay

A beach with sailboats, people relaxing, and a 'Boat Rentals' sign.

Mission Bay

9.2/10 (12,725 reviews)

Mingle with eccentric locals at bohemian beaches, soak up the sun on a Jet Ski and fish from marshy islands at San Diego’s premier water park.

See properties

A beach with palm trees, a sandy shore, and a clear blue sky.

Mission Bay Park

9.0/10 (168 reviews)

Mission Bay Park is just one of the places to see in San Diego, so why not enjoy the other things to explore during your travels? Discover the beautiful sunsets in this walkable area, or enjoy its surfing spots.

See properties

A sunset over a calm beach with palm trees and a clear sky.

De Anza Cove Park

De Anza Cove Park is just one of the places to see in San Diego, so why not enjoy the other things to explore during your travels?

See properties

beach near Mission Bay Park

Why not spend a lazy afternoon at beach near Mission Bay Park during your trip to San Diego?

See properties

Ski Beach

Why not spend a lazy afternoon at Ski Beach during your trip to San Diego?

See properties

Crown Point Shores

Why not spend a lazy afternoon at Crown Point Shores during your trip to San Diego? Discover the beautiful sunsets in this walkable area, or enjoy its surfing spots.

See properties

North Cove Beach

Why not spend a lazy afternoon at North Cove Beach during your trip to San Diego?

See properties

Brick By Brick

After visiting Brick By Brick, make a plan to see the other sights and activities in San Diego.

See properties

Frequently asked questions

What's the area like around beach near Mission Bay?

Beach near Mission Bay is located in San Diego. If you're looking for a convenient place to stay, check out the 14 hotels and other accommodations you'll find within a mile.

Where is the best place to stay close to beach near Mission Bay?

San Diego Mission Bay Resort is one of the top choices for your stay based on our traveler data, and this resort offers a full-service spa and 2 restaurants. It's located just a short 0.4 mi (0.7 km) from beach near Mission Bay. Other good choices within 5 miles include Paradise Point Resort & Spa and The Dana on Mission Bay.

How many hotels are there close to beach near Mission Bay?

Expedia has 14 hotels and other accommodations within a mile from beach near Mission Bay.

If I need to cancel the hotel reservation for my stay near beach near Mission Bay, will I receive a refund?

Yes! Most hotel reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is often 24 or 48 hours before your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of booking. Add dates, click "Search", then use the filter option "fully refundable" to get the best options available near beach near Mission Bay.

Where can I learn more about changing or cancelling my trip in the area near beach near Mission Bay?

For more information about changing or cancelling your stay near beach near Mission Bay, click here.

What can I see and do near beach near Mission Bay?

Maritime Museum of San Diego, USS Midway Museum, and San Diego Air and Space Museum feature a variety of fascinating exhibits to see while you're in town. Sights like Whaley House Museum, Star of India, and Our Lady of the Rosary Catholic Church are must-sees while exploring the area. You can watch performances at Humphreys Concerts by the Bay, San Diego Civic Theatre, and SOMA - San Diego if you're interested in local theater.

Find hotels near beach near Mission Bay, San Diego from ₩93,164

Change your mind

Treat yourself

Be picky

Check prices for these dates

Filter by

Star rating

Guest rating

Our top choices for beach near Mission Bay hotels

1. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

2. Old Town Inn

3. Cosmopolitan Hotel & Restaurant

4. The Dana on Mission Bay

5. Fairfield Inn & Suites by Marriott San Diego Pacific Beach

6. Hilton Garden Inn San Diego Old Town/SeaWorld Area

7. Holiday Inn Express San Diego - SeaWorld Area by IHG

8. Paradise Point Resort & Spa

9. Comfort Inn Sea World Area

10. Best Western Plus Hacienda Hotel Old Town

11. San Diego Mission Bay Resort

12. Bahia Resort Hotel

13. Best Western San Diego Pacific Beach/Mission Bay

14. Hyatt Regency Mission Bay Spa and Marina

15. The Alcala Hotel Mission Valley/Seaworld

16. Wyndham Garden San Diego Near SeaWorld

17. Heritage Inn San Diego

18. Americas Best Value Inn Loma Lodge

19. Motel 6 San Diego, CA - Hotel Circle - Mission Valley

20. Howard Johnson by Wyndham San Diego Sea World

Compare popular hotels close to beach near Mission Bay

Top beach near Mission Bay Hotel Reviews

Hilton Garden Inn San Diego Old Town/SeaWorld Area

Handlery Hotel

Comfort Inn Sea World Area

Bahia Resort Hotel

The Alcala Hotel Mission Valley/Seaworld

Hampton Inn San Diego/Mission Valley

Crowne Plaza San Diego - Mission Valley by IHG

Heritage Inn San Diego

GreenTree Inn San Diego Mission Bay

Other attractions near beach near Mission Bay

Mission Bay

Mission Bay Park

De Anza Cove Park

beach near Mission Bay Park

Ski Beach

Crown Point Shores

North Cove Beach

Brick By Brick

Frequently asked questions