Find hotels near Mission Bay, San Diego from ₩94,551

Start date: Check-in selected.
To Date
End date: Check-out
  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
Next weekend

Filter by

Guest rating
Guest rating
Star rating

Compare 7,555 hotels close to Mission Bay with room rates, reviews, and availability. Most hotels are fully refundable.

ITH Mission Beach Backpacker Hostel

2.0 star property
Central Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (201)
"great location and free parking available across the street. "
United States
Saquib
ITH Mission Beach Backpacker Hostel

The Dana on Mission Bay

3.5 star property
Mission Bay, 1.7 km from Mission Bay
9.0 out of 10, Wonderful, (3902)
"Staff was great, room was spotless, and map was easy to follow."
United States
Rosa
The price is ₩218,488
₩280,468 total
includes taxes & fees
Jan 4 - Jan 5, 2026
The Dana on Mission Bay

The Wayfarer San Diego

4.0 star property
Mission Beach, 3 km from Mission Bay
9.4 out of 10, Exceptional, (1707)
"Nice rooms, great location!! Staff was very friendly "
United States
Kevin M
The price is ₩270,983
₩311,484 total
includes taxes & fees
Dec 16 - Dec 17
The Wayfarer San Diego

Paradise Point Resort & Spa

4.0 star property
Mission Bay, 1.2 km from Mission Bay
8.6 out of 10, Excellent, (2346)
"Amazing place!"
United States
Barak Ben
The price is ₩189,674
₩295,619 total
includes taxes & fees
Dec 8 - Dec 9
Paradise Point Resort & Spa

Hampton Inn & Suites by Hilton San Diego SeaWorld

3.0 star property
3.2 km from Mission Bay
9.2 out of 10, Wonderful, (379)
"Great staff great breakfast and great room! "
United States
Evangelina
The price is ₩179,160
₩205,935 total
includes taxes & fees
Dec 14 - Dec 15
Hampton Inn & Suites by Hilton San Diego SeaWorld

Fairfield Inn & Suites by Marriott San Diego Pacific Beach

2.5 star property
Pacific Beach, 2.9 km from Mission Bay
9.0 out of 10, Wonderful, (793)
"good place to stay"
United States
Sisi
The price is ₩145,170
₩166,865 total
includes taxes & fees
Dec 21 - Dec 22
Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Holiday Inn Express San Diego - SeaWorld Area by IHG

2.5 star property
2.5 km from Mission Bay
8.8 out of 10, Excellent, (1002)
"The beds were very comfortable and everything was spotless. Breakfast was very good. "
United States
Raquel
The price is ₩168,925
₩194,171 total
includes taxes & fees
Dec 8 - Dec 9
Holiday Inn Express San Diego - SeaWorld Area by IHG

Bahia Resort Hotel

3.5 star property
Central Mission Beach, 2 km from Mission Bay
8.6 out of 10, Excellent, (1806)
"Staff was very friendly hotel was very very clean! "
United States
Antonio
The price is ₩186,521
₩296,046 total
includes taxes & fees
Jan 5 - Jan 6, 2026
Bahia Resort Hotel

San Diego Mission Bay Resort

4.0 star property
Mission Bay, 1.6 km from Mission Bay
8.4 out of 10, Very Good, (1305)
"great stay! Food was great and my kids loved the pool and location"
United States
ANDREA
The price is ₩335,796
₩452,094 total
includes taxes & fees
Dec 18 - Dec 19
San Diego Mission Bay Resort

Hyatt Regency Mission Bay Spa and Marina

4.0 star property
Mission Bay, 1.9 km from Mission Bay
8.4 out of 10, Very Good, (1583)
"Loved our stay "
United States
Jeremy
The price is ₩170,244
₩273,272 total
includes taxes & fees
Dec 16 - Dec 17
Hyatt Regency Mission Bay Spa and Marina

Catamaran Resort and Spa

4.0 star property
Mission Beach, 2.9 km from Mission Bay
8.6 out of 10, Excellent, (1100)
"Amazing room, phenomenal staff, highly recommend! Favorite hotel in San Diego "
United States
Daniel
The price is ₩209,982
₩319,698 total
includes taxes & fees
Jan 4 - Jan 5, 2026
Catamaran Resort and Spa

Comfort Inn Sea World Area

3.5 star property
3.2 km from Mission Bay
8.6 out of 10, Excellent, (3108)
"we like the location, free parking and breakfast."
United States
yi
The price is ₩130,873
₩150,432 total
includes taxes & fees
Dec 14 - Dec 15
Comfort Inn Sea World Area

Best Western San Diego Pacific Beach/Mission Bay

2.5 star property
2.5 km from Mission Bay
8.2 out of 10, Very Good, (181)
"Great stay, the staff was very friendly! "
United States
frances
The price is ₩105,723
₩121,523 total
includes taxes & fees
Dec 14 - Dec 15
Best Western San Diego Pacific Beach/Mission Bay

Surfer Beach Hotel

3.0 star property
Pacific Beach, 3 km from Mission Bay
8.2 out of 10, Very Good, (1175)
"Great staff, fantastic location."
Canada
Pawel
The price is ₩200,891
₩226,904 total
includes taxes & fees
Dec 17 - Dec 18
Surfer Beach Hotel

GreenTree Inn San Diego Mission Bay

2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (1841)
"The breakfast was the best part and the people also will wonderful staff wonderful also"
United States
Tempest
The price is ₩124,247
₩142,816 total
includes taxes & fees
Dec 14 - Dec 15
GreenTree Inn San Diego Mission Bay

SureStay Hotel by Best Western San Diego Pacific Beach

2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (1395)
"Perfect stay for a very good price. "
United States
Damon
The price is ₩116,121
₩131,153 total
includes taxes & fees
Dec 15 - Dec 16
SureStay Hotel by Best Western San Diego Pacific Beach

ITH Beach Bungalow Surf Hostel

2.0 star property
Pacific Beach, 3.2 km from Mission Bay
8.0 out of 10, Very Good, (254)
"Everyone was so cool and welcoming"
United States
noah
The price is ₩115,608
₩130,345 total
includes taxes & fees
Dec 18 - Dec 19
ITH Beach Bungalow Surf Hostel

Wyndham Garden San Diego Near SeaWorld

3.0 star property
2.8 km from Mission Bay
7.4 out of 10, Good, (4092)
"Clean rooms and friendly staff."
United States
Aniket
The price is ₩123,981
₩142,510 total
includes taxes & fees
Dec 14 - Dec 15
Wyndham Garden San Diego Near SeaWorld

Heritage Inn San Diego

2.0 star property
2.5 km from Mission Bay
7.2 out of 10, Good, (1147)
"Great stay"
United States
JOVEN
The price is ₩88,564
₩101,800 total
includes taxes & fees
Dec 11 - Dec 12
Heritage Inn San Diego

E-Z 8 Motel Old Town

2.5 star property
Old Town San Diego, 3.1 km from Mission Bay
6.4 out of 10, (2076)
"Yes exelent staff"
United States
ericka
The price is ₩82,263
₩94,551 total
includes taxes & fees
Dec 8 - Dec 9
E-Z 8 Motel Old Town
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top Mission Bay Hotel Reviews

Hotels near other Mission Bay attractions

Frequently asked questions

What's the area like around Mission Bay?
Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, check out the 45 hotels and other accommodations you'll find within a mile.
Where is the best place to stay near Mission Bay?
Paradise Point Resort & Spa is one of the top choices for your stay based on our traveler data, and this resort offers a marina and 5 outdoor pools. It's located just a short 0.7 mi (1.2 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 1 mi (1.6 km) away.
How many hotels can I expect to find close to Mission Bay?
Expedia has 45 hotels and other accommodations within a mile from Mission Bay.
If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?
Yes! You'll find that most hotel bookings are fully refundable provided that you cancel before the hotel's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If your reservation is non-refundable, you may still be able to cancel and be given a refund within 24 hours of booking. Enter your dates, click on "Search", then filter by "fully refundable" to review the top deals on offer near Mission Bay.
Where can I learn more about changing or cancelling my trip in the area near Mission Bay?
For more details about picking new dates or cancelling your stay near Mission Bay, head over to our customer service page.
What can I see and do near Mission Bay?
Study the collections at Maritime Museum of San Diego, Whaley House Museum, or Junipero Serra Museum. Casa de Machado y Stewart, McCoy Museum House, and Casa de Estudillo are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company, and Red Spade Theater.

Explore a world of travel with Expedia