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Our top choices for Mission Bay hotels

ITH Mission Beach Backpacker Hostel

ITH Mission Beach Backpacker Hostel
2.0 star property
Central Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (204 reviews)
"Staff was super friendly and very welcoming!! "
United States
Natalie
ITH Mission Beach Backpacker Hostel

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay, 1.6 km from Mission Bay
9.0 out of 10, Wonderful, (4,081 reviews)
"Great location and grounds!"
United States
Ethan
The price is ₩239,283
₩308,587 total
includes taxes & fees
Feb 22 - Feb 23
The Dana on Mission Bay

The Wayfarer San Diego

The Wayfarer San Diego
4.0 star property
Mission Beach, 3 km from Mission Bay
9.4 out of 10, Exceptional, (1,737 reviews)
"rooms were very nice staff was helpful location was excellent"
United States
Michele
The price is ₩261,460
₩300,535 total
includes taxes & fees
Feb 11 - Feb 12
The Wayfarer San Diego

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
Mission Beach, 2.4 km from Mission Bay
9.2 out of 10, Wonderful, (293 reviews)
"Helpful staff, amazing location, adorable hotel. Loved it. "
United States
Kimberly
The price is ₩179,243
₩202,097 total
includes taxes & fees
Feb 11 - Feb 12
Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
3.0 star property
3.2 km from Mission Bay
9.2 out of 10, Wonderful, (613 reviews)
"Great place to stay, nice room Highly recommended !!"
United States
Wilfredo
The price is ₩197,189
₩226,660 total
includes taxes & fees
Feb 17 - Feb 18
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

The Beach Cottages

The Beach Cottages
2.5 star property
Pacific Beach, 3.2 km from Mission Bay
9.2 out of 10, Wonderful, (1,000 reviews)
"Good location with friendly staff"
United States
Frank
The price is ₩204,266
₩234,789 total
includes taxes & fees
Feb 11 - Feb 12
The Beach Cottages

Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.5 km from Mission Bay
8.8 out of 10, Excellent, (1,003 reviews)
"very spacious room very clean close to everything restaurant stores Central located."
United States
Walter
The price is ₩196,970
₩226,407 total
includes taxes & fees
Feb 19 - Feb 20
Holiday Inn Express San Diego - SeaWorld Area by IHG

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2 km from Mission Bay
8.6 out of 10, Excellent, (1,877 reviews)
"Amazing place "
United States
Richard
The price is ₩221,993
₩336,340 total
includes taxes & fees
Mar 1 - Mar 2
Bahia Resort Hotel

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 1.5 km from Mission Bay
8.4 out of 10, Very Good, (1,346 reviews)
"Great place for our family getaway! Loved the S’mores on the beach! "
United States
Dani
The price is ₩290,349
₩410,895 total
includes taxes & fees
Feb 16 - Feb 17
San Diego Mission Bay Resort

Best Western San Diego Pacific Beach/Mission Bay

Best Western San Diego Pacific Beach/Mission Bay
2.5 star property
2.5 km from Mission Bay
8.4 out of 10, Very Good, (263 reviews)
"Clean hotel & great location. "
United States
yardley
The price is ₩128,979
₩148,255 total
includes taxes & fees
Mar 1 - Mar 2
Best Western San Diego Pacific Beach/Mission Bay

Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
3.2 km from Mission Bay
8.6 out of 10, Excellent, (3,349 reviews)
"Nice beds and breakfast, really convenient "
Canada
Margarita
The price is ₩136,420
₩156,808 total
includes taxes & fees
Feb 22 - Feb 23
Comfort Inn Sea World Area

Surfer Beach Hotel

Surfer Beach Hotel
3.0 star property
Pacific Beach, 3 km from Mission Bay
8.2 out of 10, Very Good, (1,197 reviews)
"Room was clean, staff was great, great location, will definitely stay there again.."
United States
Kimberly
The price is ₩245,119
₩276,849 total
includes taxes & fees
Feb 11 - Feb 12
Surfer Beach Hotel

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (1,933 reviews)
"The staff was very nice and great location"
United States
Curtis
The price is ₩134,728
₩154,863 total
includes taxes & fees
Feb 16 - Feb 17
GreenTree Inn San Diego Mission Bay

SureStay Hotel by Best Western San Diego Pacific Beach

SureStay Hotel by Best Western San Diego Pacific Beach
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (1,530 reviews)
"Room was nice, clean, staff was friendly, "
United States
philip
The price is ₩134,801
₩152,251 total
includes taxes & fees
Mar 1 - Mar 2
SureStay Hotel by Best Western San Diego Pacific Beach

ITH Beach Bungalow Surf Hostel

ITH Beach Bungalow Surf Hostel
2.0 star property
Pacific Beach, 3.2 km from Mission Bay
8.0 out of 10, Very Good, (255 reviews)
"Ocean view couldnt be better Why i picked this Not normally a hostel woman"
United States
Vickie
The price is ₩169,128
₩190,686 total
includes taxes & fees
Feb 23 - Feb 24
ITH Beach Bungalow Surf Hostel

Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.5 km from Mission Bay
7.4 out of 10, Good, (1,244 reviews)
"Clean room, staff was great during check in and checking out. "
United States
Amber
The price is ₩89,901
₩103,336 total
includes taxes & fees
Feb 11 - Feb 12
Heritage Inn San Diego

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.8 km from Mission Bay
7.4 out of 10, Good, (4,176 reviews)
"Good location friendly staff"
United States
Anya
The price is ₩129,855
₩149,260 total
includes taxes & fees
Feb 11 - Feb 12
Wyndham Garden San Diego Near SeaWorld

E-Z 8 Motel Old Town

E-Z 8 Motel Old Town
2.5 star property
Old Town San Diego, 3.1 km from Mission Bay
6.4 out of 10, (2,104 reviews)
"Better than last time"
United States
benjamin
The price is ₩87,863
₩100,994 total
includes taxes & fees
Feb 11 - Feb 12
E-Z 8 Motel Old Town

Ocean Park Inn

Ocean Park Inn
3.0 star property
Pacific Beach, 3.3 km from Mission Bay
9.4 out of 10, Exceptional, (1,013 reviews)
"Beautiful spot, close to everything, staff very helpful and friendly. "
United States
Josh
Ocean Park Inn

Tower23 Hotel

Tower23 Hotel
4.0 star property
North Pacific Beach, 3.6 km from Mission Bay
9.6 out of 10, Exceptional, (1,000 reviews)
"Helpful, friendly staff, including front desk and valet."
United States
Charles
The price is ₩436,253
₩492,718 total
includes taxes & fees
Mar 4 - Mar 5
Tower23 Hotel
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Compare popular hotels close to Mission Bay

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet friendly
WiFi included
Living area
ITH Mission Beach Backpacker Hostel
2.0 star property
9.4
Exceptional
204 reviews
View
2 outdoor pools, a heated pool, sun loungers
The Dana on Mission Bay
3.5 star property
9.0
Wonderful
4,081 reviews
View
View from property
The Wayfarer San Diego
4.0 star property
9.4
Exceptional
1,737 reviews
View
Exterior
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
9.2
Wonderful
293 reviews
View
Reception
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
3.0 star property
9.2
Wonderful
613 reviews
View

Top Mission Bay Hotel Reviews

Hotels near other Mission Bay attractions

Frequently asked questions

What's the area like around Mission Bay?
Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, check out the 45 hotels and other accommodations you'll find within a mile.
Where is the best place to stay near Mission Bay?
Paradise Point Resort & Spa is one of the top choices for your stay based on our traveler data, and this resort offers a marina and 5 outdoor pools. It's located just a short 0.8 mi (1.3 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 0.9 mi (1.5 km) away.
How many hotels can I expect to find close to Mission Bay?
Expedia has 45 hotels and other accommodations within a mile from Mission Bay.
If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?
Yes! You'll find that most hotel bookings are fully refundable provided that you cancel before the hotel's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If your reservation is non-refundable, you may still be able to cancel and be given a refund within 24 hours of booking. Enter your dates, click on "Search", then filter by "fully refundable" to review the top deals on offer near Mission Bay.
Where can I learn more about changing or cancelling my trip in the area near Mission Bay?
For more details about picking new dates or cancelling your stay near Mission Bay, head over to our customer service page.
What can I see and do near Mission Bay?
Study the collections at Maritime Museum of San Diego, Junipero Serra Museum, or Whaley House Museum. Casa de Machado y Stewart, McCoy Museum House, and Casa de Estudillo are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company, and Red Spade Theater.