Find hotels near Mission Bay, San Diego from ₩110,133

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check prices for these dates

This weekend
Next weekend

Filter by

Guest rating
Guest rating
Star rating

Our top choices for Mission Bay hotels

Boardwalk Hotel: Bikes, Boards & Beach Gear Included

Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (377 reviews)
"Amazing spot would recommend it 10 outta 10!!"
United States
Hardeep
The price is ₩355,777
₩401,142 total
includes taxes & fees
Jun 4 - Jun 5
Boardwalk Hotel: Bikes, Boards & Beach Gear Included

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay, 1.6 km from Mission Bay
9.0 out of 10, Wonderful, (4,375 reviews)
"NICE PLACE TO STAY"
United States
René
The price is ₩302,086
₩390,860 total
includes taxes & fees
Jun 7 - Jun 8
The Dana on Mission Bay

ITH Mission Beach Backpacker Hostel

ITH Mission Beach Backpacker Hostel
2.0 star property
Central Mission Beach, 2.4 km from Mission Bay
9.4 out of 10, Exceptional, (216 reviews)
"Staff was great, all areas of the property were clean and I felt safe"
United States
Jessi
The price is ₩133,643
₩150,682 total
includes taxes & fees
Jun 4 - Jun 5
ITH Mission Beach Backpacker Hostel

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay, 1.3 km from Mission Bay
8.8 out of 10, Excellent, (2,629 reviews)
"Beautiful Vacation spot."
United States
Daniel
The price is ₩387,398
₩525,628 total
includes taxes & fees
Jun 7 - Jun 8
Paradise Point Resort & Spa

The Wayfarer San Diego

The Wayfarer San Diego
4.0 star property
Mission Beach, 3 km from Mission Bay
9.4 out of 10, Exceptional, (1,786 reviews)
"Beautiful property and great location."
United States
Michael
The price is ₩338,822
₩389,463 total
includes taxes & fees
Jun 4 - Jun 5
The Wayfarer San Diego

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 2 km from Mission Bay
8.8 out of 10, Excellent, (2,109 reviews)
"Enjoyed my stay."
United States
Oswaldo
The price is ₩243,339
₩364,135 total
includes taxes & fees
Jun 7 - Jun 8
Bahia Resort Hotel

Holiday Inn Express San Diego - SeaWorld Area by IHG

Holiday Inn Express San Diego - SeaWorld Area by IHG
2.5 star property
2.5 km from Mission Bay
9.0 out of 10, Wonderful, (1,000 reviews)
"We enjoyed our stay! Our room was clean and the staff were friendly. We also enjoyed the yummy breakfast. We definitely recommend to anyone who is visiting SD and visiting the zoo or sea world!"
United States
Isela
The price is ₩258,063
₩296,631 total
includes taxes & fees
Jun 7 - Jun 8
Holiday Inn Express San Diego - SeaWorld Area by IHG

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay, 1.5 km from Mission Bay
8.6 out of 10, Excellent, (1,460 reviews)
"Great resort!"
United States
Jean-Michelle
The price is ₩499,429
₩654,343 total
includes taxes & fees
Jun 14 - Jun 15
San Diego Mission Bay Resort

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town
3.0 star property
3.2 km from Mission Bay
9.2 out of 10, Wonderful, (1,005 reviews)
"Staff was amazing and loved the place"
United States
Angela
The price is ₩222,056
₩255,243 total
includes taxes & fees
Jun 7 - Jun 8
Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Fairfield Inn & Suites by Marriott San Diego Pacific Beach
3.0 star property
Pacific Beach, 2.9 km from Mission Bay
8.8 out of 10, Excellent, (898 reviews)
"Great service from start to finish and very clean hotel "
United States
Jesus
The price is ₩245,919
₩282,671 total
includes taxes & fees
Jun 28 - Jun 29
Fairfield Inn & Suites by Marriott San Diego Pacific Beach

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay, 1.9 km from Mission Bay
8.4 out of 10, Very Good, (1,628 reviews)
"Amazing place!"
United States
Yesenia
The price is ₩258,063
₩376,954 total
includes taxes & fees
Jun 7 - Jun 8
Hyatt Regency Mission Bay Spa and Marina

Catamaran Resort and Spa

Catamaran Resort and Spa
4.0 star property
Mission Beach, 2.9 km from Mission Bay
8.6 out of 10, Excellent, (1,264 reviews)
"Great location, super nice staff and perfect room"
United States
Alexandre
The price is ₩387,398
₩526,057 total
includes taxes & fees
Jun 7 - Jun 8
Catamaran Resort and Spa

Best Western San Diego Pacific Beach/Mission Bay

Best Western San Diego Pacific Beach/Mission Bay
2.5 star property
Bay Park, 2.5 km from Mission Bay
8.2 out of 10, Very Good, (405 reviews)
"Clean room great staff wonderful stay was pleasantly surprised with everything 👌"
United States
Sofia
The price is ₩152,288
₩175,047 total
includes taxes & fees
Jun 17 - Jun 18
Best Western San Diego Pacific Beach/Mission Bay

Comfort Inn Sea World Area

Comfort Inn Sea World Area
3.5 star property
3.2 km from Mission Bay
8.6 out of 10, Excellent, (3,728 reviews)
"Nice staff and good breakfast"
United States
Fernando
The price is ₩180,265
₩207,210 total
includes taxes & fees
Jun 7 - Jun 8
Comfort Inn Sea World Area

Surfer Beach Hotel

Surfer Beach Hotel
3.0 star property
Pacific Beach, 3 km from Mission Bay
8.2 out of 10, Very Good, (1,291 reviews)
"Great place!"
United States
Laura
The price is ₩357,472
₩403,747 total
includes taxes & fees
Jun 15 - Jun 16
Surfer Beach Hotel

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (2,147 reviews)
"Great experience, will stay here again"
United States
Victoria
The price is ₩169,411
₩194,732 total
includes taxes & fees
Jun 4 - Jun 5
GreenTree Inn San Diego Mission Bay

SureStay Hotel by Best Western San Diego Pacific Beach

SureStay Hotel by Best Western San Diego Pacific Beach
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very Good, (1,569 reviews)
"Nice room clean good breakfast"
United States
Michael
The price is ₩153,624
₩173,511 total
includes taxes & fees
Jun 7 - Jun 8
SureStay Hotel by Best Western San Diego Pacific Beach

ITH Beach Bungalow Surf Hostel

ITH Beach Bungalow Surf Hostel
2.0 star property
Pacific Beach, 3.2 km from Mission Bay
8.0 out of 10, Very Good, (263 reviews)
"Amazing staff! Great vibes! I will definitely be returning"
United States
mike
The price is ₩97,685
₩110,133 total
includes taxes & fees
Jun 9 - Jun 10
ITH Beach Bungalow Surf Hostel

Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.5 km from Mission Bay
7.4 out of 10, Good, (1,491 reviews)
"I really like the hotel Was close to sea world and lots of eating places with in walking distance."
United States
Latrice
The price is ₩103,134
₩118,542 total
includes taxes & fees
Jun 4 - Jun 5
Heritage Inn San Diego

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.8 km from Mission Bay
7.4 out of 10, Good, (4,242 reviews)
"Nice stay, clean room"
United States
Luis
The price is ₩165,464
₩190,192 total
includes taxes & fees
Jun 4 - Jun 5
Wyndham Garden San Diego Near SeaWorld
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Compare popular hotels close to Mission Bay

Property
Property class
Guest rating
Breakfast included
Pool
Spa
Pet friendly
WiFi included
Exterior
Boardwalk Hotel: Bikes, Boards & Beach Gear Included
3.0 star property
9.4
Exceptional
377 reviews
View
2 outdoor pools, a heated pool, sun loungers
The Dana on Mission Bay
3.5 star property
9.0
Wonderful
4,375 reviews
View
Beach nearby, 5 beach bars
ITH Mission Beach Backpacker Hostel
2.0 star property
9.4
Exceptional
216 reviews
View
5 outdoor pools, a heated pool, pool umbrellas, sun loungers
Paradise Point Resort & Spa
4.0 star property
8.8
Excellent
2,629 reviews
View
Outdoor pool, a heated pool
The Wayfarer San Diego
4.0 star property
9.4
Exceptional
1,786 reviews
View

Top Mission Bay Hotel Reviews

Hotels near other Mission Bay attractions

Frequently asked questions

What's the area like around Mission Bay?
Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, check out the 46 hotels and other accommodations you'll find within a mile.
Where is the best place to stay near Mission Bay?
Paradise Point Resort & Spa is one of the top choices for your stay based on our traveler data, and this resort offers a marina and 5 outdoor pools. It's located just a short 0.8 mi (1.3 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 0.9 mi (1.5 km) away.
How many hotels can I expect to find close to Mission Bay?
Expedia has 46 hotels and other accommodations within a mile from Mission Bay.
If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?
Yes! You'll find that most hotel bookings are fully refundable provided that you cancel before the hotel's cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If your reservation is non-refundable, you may still be able to cancel and be given a refund within 24 hours of booking. Enter your dates, click on "Search", then filter by "fully refundable" to review the top deals on offer near Mission Bay.
Where can I learn more about changing or cancelling my trip in the area near Mission Bay?
For more details about picking new dates or cancelling your stay near Mission Bay, head over to our customer service page.
What can I see and do near Mission Bay?
Study the collections at Maritime Museum of San Diego, Whaley House Museum, or Junipero Serra Museum. Casa de Machado y Stewart, McCoy Museum House, and Casa de Estudillo are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, San Diego Black Ensemble Theater, and Cygnet Theater Company.