San Juan Island Vacations

Book a Hotel + Flight or Car together to unlock savings

  • Plan, book, travel with confidence

  • Better together

    Save up to ₩1,660,000 when you book a flight and hotel together*

  • Find the right fit

    With over 300,000 hotels worldwide, it's easy to create a perfect package

  • Rest easy

    Plan, book, and manage your trip all in one place

Find the Best San Juan Island Vacation Packages

San Juan Island Hotel Deals

Friday Harbor Suites

Friday Harbor Suites

2.5 out of 5
680 Spring Street Friday Harbor WA
Fully refundableReserve now, pay when you stay
The price is ₩259,462 per night from May 17 to May 18
₩259,462
₩287,089 total
May 17 - May 18
includes taxes & fees
8.6/10 Excellent! (1,005 reviews)
yes

Reviewed on May 3, 2026

Friday Harbor Suites
Earthbox Inn & Spa

Earthbox Inn & Spa

3 out of 5
410 Spring Street Friday Harbor WA
The price is ₩318,714 per night from May 21 to May 22
₩318,714
₩352,657 total
May 21 - May 22
includes taxes & fees
8.8/10 Excellent! (1,002 reviews)
Only a quick overnight, but they took dogs. Higher priced, and much nicer than what we needed, but would go back anytime. Spent a lot of time in Friday Harbor over decades, and never knew this place was there. Off season, so hard to guess what like in high season, but excellent experience.

Reviewed on May 4, 2026

Earthbox Inn & Spa
Inn to the Woods B&B

Inn to the Woods B&B

3.5 out of 5
46 Elena Drive Friday Harbor WA
9.8/10 Exceptional! (95 reviews)
Didn't use the hot tub. The breakfast was just what I ordered and it was excellent.

Reviewed on Mar 31, 2026

Get rates
Inn to the Woods B&B
See all 852 properties in San Juan Island
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Discover the most popular places to visit in San Juan Island

Reuben Tarte Memorial Park

After visiting Reuben Tarte Memorial Park, make a plan to see the other sights and activities in Friday Harbor. While you're in the area, stroll along the waterfront.

Reuben Tarte Memorial Park

Frequently asked questions

Can I cancel my flight booking to San Juan Island due to COVID-19?
If you haven't booked yet, scan the terms and conditions of the airfare you're considering. If you've already locked in your flight to San Juan Island, click through to our Customer Service Portal. The information here will help determine which COVID-19 policies are applicable to your reservation and guide you with the next steps.
What's the best way to find cheap flights to San Juan Island that have flexible change policies?
At Expedia, we've been channeling our inner yoga master to provide you with the most flexible airfares in town. Simply click on "No change fee" directly beneath the "Flexible change policies" subheading to find your perfect flight to San Juan Island.
What are some of the general tips for travelers to San Juan Island during the COVID-19 outbreak?
With the continuation of the COVID-19 outbreak, traveling now comes with a few extra challenges. Make a note of these valuable tips before jumping on your plane to San Juan Island:
  • Before you book a flight, find out if any travel restrictions apply — in both your destination and origin. Get up-to-date information by reviewing government websites.
  • Wear a face mask during airport screening. A TSA employee will require you to lower your mask temporarily for identification purposes.
  • Instead of handing a TSA officer your boarding pass, place it directly on the reader yourself. When that's done, hold it up for inspection.
  • You can take one container of hand sanitizer up to 12 oz (350 ml) in your carry-on baggage. You'll need to remove it for screening.
  • Put any personal items (e.g, keys, phone and coins) in your carry-on instead of a bin to minimize handling during the screening process.
  • Separate any food you're carrying for X-ray scanning. Food items often set off the alarm. Placing them in a clear plastic bag and into a bin reduces the need for a TSA officer to handle and inspect your belongings.

Which airlines fly to San Juan Island?
Let Alaska Airlines get you there. This popular carrier operates 9722 flights a month to Seattle - Tacoma Intl. Airport (SEA), a San Juan Island gateway.
How can I find cheap tickets to San Juan Island?
A helpful strategy for scoring cheap fares is to be flexible with your travel dates. Begin with searching for your flight to San Juan Island, then click on the "flexible dates" link for a list of prices for nearby days. Another good tip? Book in advance. For an idea of fares, was the best price for a flight to San Juan Island in the last seven days.
How much is a flight to San Juan Island?
You could have scored a return air ticket to San Juan Island from anywhere between and in the last seven days. For one-way trips leaving from (), the lowest amount paid during this period was just .
What are the most popular airports to fly into in San Juan Island?
Pack your suitcase and fly into Seattle - Tacoma Intl. Airport (SEA), San Juan Island's main flight hub. Book a fare on one of the 17599 flights that touch down here every month.
When is the cheapest time to fly to San Juan Island?
If you'd prefer to spend your money exploring San Juan Island rather than on getting there, jet off early in the week. The cheapest day to fly is generally Tuesday, with Monday close behind. With many folks keeping their travel to weekends, Saturday often has the costliest airfares.
How much is a plane ticket to San Juan Island?
In the last seven days, plane fares to San Juan Island cost between and . The early bird catches the worm, so land yourself a great deal today.
Which airlines with flights to San Juan Island employ COVID-19 cleanliness policies?
As people begin traveling once again, the majority of airlines have introduced physical distancing and other preventive measures to reduce the spread of COVID-19. Here are just some of them:
  • Alaska Airlines - this airline is known for providing passenger masks and cleaning with disinfectant.
  • Delta - this airline is known for electrostatic cleaning and cleaning with disinfectant.
  • Southwest Airlines - this airline is known for providing passenger masks and cleaning with disinfectant.

Explore a world of travel with Expedia

* Savings based on package bookings compared to the price of the same components booked separately. Savings not available on all packages.