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Our top choices for Mission Bay hotels

LUMA Hotel San Francisco

LUMA Hotel San Francisco
4.0 star property
Mission Bay
9.6 out of 10, Exceptional, (2,447 reviews)
"Great stay! "
United States
Jeremy
The price is ₩369,399
₩434,763 total
includes taxes & fees
Apr 5 - Apr 6
LUMA Hotel San Francisco

The Evergreen

The Evergreen
2.0 star property
20.3 km from Mission Bay
9.2 out of 10, Wonderful, (458 reviews)
"Easy access, beautiful location and nice stay."
United States
Guadalupe
The price is ₩180,249
₩201,878 total
includes taxes & fees
Mar 12 - Mar 13
The Evergreen

Marin Lodge

Marin Lodge
2.0 star property
26.6 km from Mission Bay
9.6 out of 10, Exceptional, (1,002 reviews)
"Friendly staff, easy check in, spacious clean room, comfortable bed, quiet, great value for the area. Lots of good dining options nearby. Highly recommend, will be back."
United States
Brad
The price is ₩161,705
₩181,110 total
includes taxes & fees
Mar 9 - Mar 10
Marin Lodge

The Westin San Francisco Airport

The Westin San Francisco Airport
4.0 star property
18.7 km from Mission Bay
8.8 out of 10, Excellent, (1,961 reviews)
"Friendly staff, great location for the airport and food was tasty. However, rooms are tired and the restaurant opens quite late in the morning"
United Kingdom
keith
The price is ₩159,034
₩226,275 total
includes taxes & fees
Mar 13 - Mar 14
The Westin San Francisco Airport

Hotel Riu Plaza Fisherman's Wharf

Hotel Riu Plaza Fisherman's Wharf
4.0 star property
Fisherman's Wharf, 4.5 km from Mission Bay
9.0 out of 10, Wonderful, (7,390 reviews)
"excellent breakfast and location "
United States
Leslie
The price is ₩218,290
₩318,038 total
includes taxes & fees
Mar 18 - Mar 19
Hotel Riu Plaza Fisherman's Wharf

Hilton San Francisco Airport Bayfront

Hilton San Francisco Airport Bayfront
4.0 star property
20.5 km from Mission Bay
8.6 out of 10, Excellent, (2,939 reviews)
"The room and breakfast was perfect "
United States
Daniel
The price is ₩156,928
₩178,419 total
includes taxes & fees
Apr 3 - Apr 4
Hilton San Francisco Airport Bayfront

Hotel Caza Fisherman's Wharf

Hotel Caza Fisherman's Wharf
4.0 star property
Fisherman's Wharf, 4.6 km from Mission Bay
9.0 out of 10, Wonderful, (3,850 reviews)
"Nice stay"
United States
Richard
The price is ₩195,144
₩301,261 total
includes taxes & fees
Mar 29 - Mar 30
Hotel Caza Fisherman's Wharf

The Marina Inn on San Francisco Bay

The Marina Inn on San Francisco Bay
3.5 star property
19.6 km from Mission Bay
8.6 out of 10, Excellent, (2,346 reviews)
"staff was amazing hotel could use a renovation but was still perfect for what we needed"
United States
ethan
The Marina Inn on San Francisco Bay

Pacifica Beach Hotel

Pacifica Beach Hotel
2.5 star property
21.3 km from Mission Bay
8.0 out of 10, Very Good, (1,008 reviews)
"Easy check-in, courteous staff, across the street from beach, 3 blocks from stores & restaurants."
United States
Constance
The price is ₩175,279
₩203,763 total
includes taxes & fees
Mar 12 - Mar 13
Pacifica Beach Hotel

The Lodge at Tiburon

The Lodge at Tiburon
3.5 star property
12.9 km from Mission Bay
8.8 out of 10, Excellent, (1,005 reviews)
"Excellent service Quiet Clean Easy access to dining market and daily walking for miles, if you wish"
United States
Nancy
The price is ₩278,548
₩370,794 total
includes taxes & fees
Mar 9 - Mar 10
The Lodge at Tiburon

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
Fisherman's Wharf, 4.5 km from Mission Bay
8.6 out of 10, Excellent, (2,460 reviews)
"Great location on the wharf, with many restaurants, and activities in the area."
United States
Frank
The price is ₩218,079
₩317,775 total
includes taxes & fees
Mar 15 - Mar 16
Hotel Zephyr San Francisco

Aloft San Francisco Airport

Aloft San Francisco Airport
3.0 star property
18.7 km from Mission Bay
9.0 out of 10, Wonderful, (2,263 reviews)
"Great place! "
United States
Jon
The price is ₩168,410
₩193,580 total
includes taxes & fees
Mar 20 - Mar 21
Aloft San Francisco Airport

Inn at Rockaway San Francisco Pacifica

Inn at Rockaway San Francisco Pacifica
2.5 star property
20.2 km from Mission Bay
8.2 out of 10, Very Good, (1,012 reviews)
"Clean and comfortable room with access to the beach and dining options."
United States
Brad
Inn at Rockaway San Francisco Pacifica

Lafayette Park Hotel & Spa

Lafayette Park Hotel & Spa
4.0 star property
29 km from Mission Bay
9.4 out of 10, Exceptional, (1,013 reviews)
"Very nice, enjoyed my time here"
United States
David
The price is ₩351,819
₩385,929 total
includes taxes & fees
Mar 15 - Mar 16
Lafayette Park Hotel & Spa

DoubleTree by Hilton Hotel Berkeley Marina

DoubleTree by Hilton Hotel Berkeley Marina
4.0 star property
12.8 km from Mission Bay
8.2 out of 10, Very Good, (4,340 reviews)
"Great location great breakfast restaurant!"
United States
Maria
The price is ₩166,452
₩191,744 total
includes taxes & fees
Mar 15 - Mar 16
DoubleTree by Hilton Hotel Berkeley Marina

Embassy Suites by Hilton San Francisco Airport Waterfront

Embassy Suites by Hilton San Francisco Airport Waterfront
3.5 star property
20.3 km from Mission Bay
8.6 out of 10, Excellent, (1,971 reviews)
"Great stay!"
United States
William
The price is ₩181,629
₩206,503 total
includes taxes & fees
Mar 29 - Mar 30
Embassy Suites by Hilton San Francisco Airport Waterfront

Cow Hollow Inn & Suites

Cow Hollow Inn & Suites
3.5 star property
Marina District, 5.2 km from Mission Bay
9.2 out of 10, Wonderful, (1,517 reviews)
"Good location nice rooms "
United States
Gillian
The price is ₩187,258
₩217,804 total
includes taxes & fees
Mar 15 - Mar 16
Cow Hollow Inn & Suites

Hampton Inn & Suites Oakland Airport-Alameda

Hampton Inn & Suites Oakland Airport-Alameda
2.5 star property
14 km from Mission Bay
8.8 out of 10, Excellent, (1,006 reviews)
"Lovely stay! "
United States
Chris
The price is ₩164,410
₩187,748 total
includes taxes & fees
Apr 5 - Apr 6
Hampton Inn & Suites Oakland Airport-Alameda

The Dylan at SFO

The Dylan at SFO
3.0 star property
19.2 km from Mission Bay
9.2 out of 10, Wonderful, (1,852 reviews)
"great hotel, well designed, comfortable beds, easy access to the bart and aiport"
United States
Alan
The Dylan at SFO

Hyatt Place San Francisco Downtown

Hyatt Place San Francisco Downtown
3.0 star property
0.9 km from Mission Bay
9.4 out of 10, Exceptional, (2,034 reviews)
"Check-in and check-out went smoothly with staff, clean rooms and overall nice hotel. "
United States
Giovanna
The price is ₩250,717
₩295,081 total
includes taxes & fees
Mar 29 - Mar 30
Hyatt Place San Francisco Downtown
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most. Learn more about Mission Bay
Learn more about Mission Bay

Union Square

Major tourist destination in downtown San Francisco, Union Square boasts shopping, hotels, and theaters. Explore department stores, boutiques, and galleries, or catch a performance at various theaters. Enjoy the Dewey Monument and stunning views from nearby hotels. Easily accessible via cable car lines, buses, and subway systems.

Fisherman's Wharf

Discover Pier 39, Ghirardelli Square, and the San Francisco Maritime National Historical Park in this bustling tourist hotspot. Savor seafood at family-owned restaurants and explore the sea lion colony, while enjoying convenient cable car access.

Downtown San Francisco

Serving as San Francisco's central business district, this area boasts Northern California's two tallest buildings, the Salesforce Tower and Transamerica Pyramid. Explore shopping malls like the Embarcadero Center and enjoy parks such as Sue Biermann Park, all easily accessible via Muni bus and rail lines.

South of Market

From baseball games to top-notch art exhibits, find endless entertainment in one of San Francisco’s fastest-growing neighborhoods.

Nob Hill

Luxury hotels, historic mansions, and Michelin-starred restaurants abound in this upscale area. Explore Union Square shopping district, Grace Cathedral, and the SF Masonic Auditorium for a taste of culture and history.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
Travelers will be sure to enjoy their time in San Francisco's Mission Bay neighborhood. Be sure to check out Chase Center and Lefty O'Doul Bridge as part of your Mission Bay travel plans.
Where is the best place to stay in Mission Bay?
Based on Expedia customer reviews, LUMA Hotel San Francisco is the highest ranked property in Mission Bay. This hotel is a short 5-minute walk from Oracle Park, and it offers a restaurant and a fitness center.
How many hotels are there in Mission Bay?
When you want to kick up your feet after a day of exploring the sights in San Francisco, you can choose from 16 Expedia hotels and other accommodations in Mission Bay.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes! The majority of hotel room reservations are fully refundable if you cancel prior to the accommodation's cancellation deadline, which often is within 24-48 hours of your check-in date. If your reservation is non-refundable, you may still be able to cancel and receive a refund within a 24-hour period of booking. Put your dates in and click on "Search", then filter by "fully refundable" to get the best deals in Mission Bay.
Where can I learn more about changing or cancelling my trip to Mission Bay?
To access more information about changing or cancelling your trip to Mission Bay, head over to our customer service page.
What are the top things to see and do in Mission Bay?
Chase Center, Lefty O'Doul Bridge, and Lucky Strike San Francisco are just a few attractions to check out in Mission Bay. While you're out sightseeing, Oracle Park and Pier 39 are a couple of additional sights to visit in San Francisco.
How can I get around Mission Bay and the greater San Francisco area?
For a quick way to explore the city, catch a ride on metro transit at UCSF/Chase Center Stop, Mission Rock Station, or UCSF Mission Bay Stop. To venture out of town, take a train from San Francisco Station.